Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq4488 172 6e-38
seq5267 149 7e-31
seq5396 136 4e-27
seq5238 109 6e-19
>seq4488
Length=490991
Score = 172 bits (190), Expect = 6e-38
Identities = 312/454 (69%), Gaps = 2/454 (0%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
||||||||||| ||||| ||||| || ||||| | |||||| | || || | || ||
Sbjct 138875 CCAGTTCCGATGCCCTCGGCACCGTTTATCAGCACCATCGGTATGATGGGCAGATACCAC 138816
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|||||| | || | | || |||||| ||| | |||| | || ||| |||
Sbjct 138815 AGAGGCTCGATCTTCTGGCCATCGTCCACCTGGTAGTCCAGCAGAGGATCGTCCAGGGGA 138756
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| | | ||| |||| || | | ||||||||| ||||||| ||| || |
Sbjct 138755 TGGTAGATGAGTCGGGTCAGGGGAGACATCAAAGTGAAAATATAACGAGCGCTGGCGCAA 138696
Query 117332 TCCTTGCCACCAG-CAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTT 117390
||||| || || | |||| || |||||||| || || | ||||||| || || | ||
Sbjct 138695 TCCTTTCCGCCCGTCAAG-CGAGTACCGAACTGACCGCGTGGCTCCAGCAGATTAATATT 138637
Query 117391 GTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACAATCGTACCTTGGAGGCTCGCCTCACC 117450
||| |||||||||||||| || |||| || || || || || || |||||||
Sbjct 138636 GTTTGCGCCCACAAAGTTCTGGGCCAGATTAACGATTGTCATCTGCAGCGAAACCTCACC 138577
Query 117451 ATGGTGATACGCCGTCTGCTCCGCCACGTAGCCCGCCAGCTGAGCCACCTTCATGTCTGA 117510
||||| || |||| | ||| |||||| | || | ||||| |||||||||| ||
Sbjct 138576 GTGGTGGTAGGCCGACATCTCGGCCACGGAACCAGATAGCTGGGCCACCTTCACCTCACG 138517
Query 117511 CGTCAGGTTCTTCTTGAGGCAGGCATAAATCACCTTGCGCTGACTTGGCTTCAGACCATC 117570
| | ||| |||||| ||||| | |||||||||||||||| ||||||||| || ||
Sbjct 138516 CTTGTCGTTTCTCTTGAAGCAGGTGAACATCACCTTGCGCTGACCTGGCTTCAGGCCGTC 138457
Query 117571 CGCCACGTGAGGGATCGAACGCTTGATGTCCTCA 117604
| ||| || || || |||| | ||||| ||
Sbjct 138456 CACCAGACTGGGAATGGAGCGCTCGTTGTCCGCA 138423
Score = 149 bits (164), Expect = 7e-31
Identities = 309/455 (68%), Gaps = 10/455 (2%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| || ||||||||||| |||||||| | ||| | |||||| | || || || ||
Sbjct 138875 CCAGTTCCGATGCCCTCGGCACCGTTTATCAGCACCATCGGTATGATGGGCAGATACCAC 138816
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGGA 151995
||||| | || || || || |||| | ||| | || | | || ||| |||
Sbjct 138815 AGAGGCTCGATCTTCTGGCCATCGTCCACCTGGTAGTCCAGCAGAGGATCGTCCAGGGGA 138756
Query 151996 TCGAATATCCGTCGAGTCATAGGAC---TCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052
| | | || |||| |||| ||| ||||| ||||| || || || | ||||||
Sbjct 138755 TGGTAGATGAGTCGGGTCAGGGGAGACATCAAA---GTGAAAATATAACGAGCGCTGGCG 138699
Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112
|||||| || || | || || || || ||||| || ||||| || || || |
Sbjct 138698 CAATCCTTTCCGCCCGTCAAGCGAGTACCGAACTGACCGCGTGGCTCCAGCAGATTAATA 138639
Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172
||||| |||||||| || ||||| |||| ||| || || || |||||| | |||
Sbjct 138638 TTGTTTGCGCCCACAAAGTTCTGGGCCAGATTAACGATTGTCATCTGCAGCGAAACCTCA 138579
Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTC- 152231
|||||||| || |||| | ||| || | | | || | | ||| |||||||||| ||
Sbjct 138578 CCGTGGTGGTAGGCCGACATCTCGGCCACGGAACCAGATAGCTGGGCCACCTTCACCTCA 138519
Query 152232 CG-TCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290
|| | ||| ||| |||||| |||| | | |||||||||||||| ||| |||| |
Sbjct 138518 CGCTTGTC--GTTTCTCTTGAAGCAGGTGAACATCACCTTGCGCTGACCTGGCTTCAGGC 138461
Query 152291 CGTCCACCACGTGAGGAATCGAACGCTTGATGTCC 152325
||||||||| ||||| || |||| | |||||
Sbjct 138460 CGTCCACCAGACTGGGAATGGAGCGCTCGTTGTCC 138426
>seq5267
Length=4296760
Score = 149 bits (164), Expect = 7e-31
Identities = 529/815 (65%), Gaps = 19/815 (2%)
Strand=Plus/Plus
Query 74463 TAATCACCGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATC 74522
|| || || ||| ||| || || ||||||||||| || |||| |||||| |||||||
Sbjct 668461 TACTCGCCCACCTTCTTCTCGAAGAAGTTGGTCTTGCCGTCCAGCGAGATCATCTCCATG 668520
Query 74523 CAGTCGAAAGGGTTCTTTGCACCGTAAATA--GGCTTCTCCCCAAACTGTGCCATGAGGC 74580
||| ||| |||||||| | | ||| || | | | ||| | || ||| || |
Sbjct 668521 AAGTTGAAGGGGTTCTTGGTATTGTAGATCTTGCCAACGCCC--AGCTCCACCAGCAGAC 668578
Query 74581 GATCCGCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGC 74640
|||||||||| |||| |||||||||| ||| | || |||||||||||| ||
Sbjct 668579 GATCCGCCACGAATTCGATGTACTGCGACATGAGGTCGCAATTCATGCCGATGAGGTTTA 668638
Query 74641 ACGGCAGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTG--GACAATCTT 74698
|||| || ||||||| ||||| ||| | | || | ||| | || ||||
Sbjct 668639 CGGGCAAGGCATCGGTGAGGAACTCCTGCTCTA--TGGCCACAGCATCGCGGATGATCTC 668696
Query 74699 GTGAATGTCTTTG-GAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGCGTCACGGCAAACT 74757
| ||| | | | || | | | | || ||| | | | | ||||||||| |
Sbjct 668697 GATGATGCGCTCGCGCCTGGGTCGCTGCAC-CAAGTGCTGGAACATCAGCACGGCAAAGT 668755
Query 74758 CCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAA 74817
| ||| ||| || || | | || | || || || || | || || ||||| |
Sbjct 668756 CGCAGTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGTCCCGGCATCA 668815
Query 74818 GTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGA 74877
| || |||||||||| ||| || |||| |||| || |||||||||||||| ||||
Sbjct 668816 GACCGCGCTTCTTCAGCCAGAAAATGGAGGCGAAGCTGCCGCTGAAGAAGATGCCCTCGA 668875
Query 74878 CACACGCAAAGGCGACAAGGCGTTGCGCGAAC---GGTGCATCGGAAGTCATCCAAGTCT 74934
| |||||||| | | ||| | | |||| | || | ||| | ||||| |
Sbjct 668876 CGGCGGCAAAGGCAATGATGCGCTCCCCGAAGTTGGCCGCCTTGGAGGAGATCCAGGAAA 668935
Query 74935 GAGCCCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTG 74994
| ||||| || || || || || || || || | || ||||| || | ||| ||| |
Sbjct 668936 GGGCCCAGTCCGCCTTGCGCTTCACAGCGGGCATTGTCTCGATGGCGTTGAACAGGTATT 668995
Query 74995 CCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAA 75054
| || | |||||| || | |||| |||| | |||| ||||||| || |
Sbjct 668996 CGCGCTGGTGCGGATCCCGGATGTAGGTGTCGATCAGCACACTGTACATCTCCGAGTGCA 669055
Query 75055 TCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCC 75113
||| || ||| |||| | | ||||| | || ||||| | ||||| || |||
Sbjct 669056 CGTTCTCCATGG-CGATCTGGAAGCCATAGAAGCAGCGAGCCTCCGTGATCTGCACCTCC 669114
Query 75114 TT--TGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAG 75171
| |||| || | | | ||||| | |||||||| || ||||||||||| || |
Sbjct 669115 TGGCTGAAGCGCTC--GACCAGGTTCTCGTTAACGATGCCATCGGAGGCGGCGAAGAAGG 669172
Query 75172 CCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAATCCTTCAGGT 75231
|||| || ||| ||||||||||| ||||| | || || ||| || ||||||
Sbjct 669173 CCAGCACGTGCGAGATGAAGTGGCGCTCGTCGTCCTTCAGGCGGTGCCAGTCGGTCAGGT 669232
Query 75232 CCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266
|| | | ||| | |||||| || |||||||||
Sbjct 669233 CCTTGGAGAGATCCACCTCCTCCACGGTCCAGAAA 669267
>seq5396
Length=9561034
Score = 136 bits (150), Expect = 4e-27
Identities = 451/699 (65%), Gaps = 2/699 (0%)
Strand=Plus/Minus
Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329
||||| || || || ||||||| || || ||||| || |||| ||| ||| |||||
Sbjct 8235431 TACTTCACTCATGCGTCGCCAACGCTTTTTGCCGCTGCCACAAATCGCCCGCAGCTGTCG 8235372
Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389
|| ||||| || | |||| | ||||| ||||| ||||| | || | | ||
Sbjct 8235371 TCTTGTTTCCTCTTGACCATGACAGCCGACTCCATCGAGGGCATTTTTAAGTCCGTGGAG 8235312
Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAACGTCCGT 53449
|||| ||| ||||| |||| | | || || || || | || | | ||||
Sbjct 8235311 CAGTGCGCCATGATCTCGAAGTCGGCCGGCGGCATTGGACTTAACGTCCATTGCATCCGA 8235252
Query 53450 GCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTC 53509
|| || ||||| | || || ||||||||| || |||| | || || ||| |
Sbjct 8235251 GCAAAGGGCACCTCGATTTGCGGCACGAACGGCACTTCCAATGGCCTGGTTCCCATGTTG 8235192
Query 53510 CGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCG 53569
| ||||||||||| ||| || || ||| | ||||| || || ||||| || |
Sbjct 8235191 AGGGTCTTCAACAATGTGGCGCGCTATGTCGATCAGGGAGGCGGCAAGCGTCCCGGTGCC 8235132
Query 53570 TTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTG 53629
|| ||||| ||||| ||||| |||||| | ||| | | ||||| || || || |
Sbjct 8235131 TTTGCCATTTACCTGGAGCCCTGGCACTCGGACGTCTTTGAGTTCCTGGAACTTAAGAAG 8235072
Query 53630 AATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGA 53688
|| || | || |||| ||| ||| || ||||| ||| || |||||||| || ||
Sbjct 8235071 AACACCGGCAAGGAGGAGAATCGCGCCCGCGATCTGTTCTAC-GCCCTGTGGATACCCGA 8235013
Query 53689 CCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTG 53748
||||| ||| | || ||| | | || |||| || ||||| ||| | | ||
Sbjct 8235012 TCTCTTTATGAAGCGCGTCGAGGCCAATGGAGATTGGTCACTAATGTGTCCGCATAAATG 8234953
Query 53749 CCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGT 53808
||| ||||| || | ||| | || || || || | || ||||| || ||| |
Sbjct 8234952 CCCTGGCCTTCACGATGTGTGGGGCGATGAATTCGAAAAGTTGTATGAGAAGTATGAGCA 8234893
Query 53809 TCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAG 53868
|||| || ||| | ||| ||||| | | ||| || || | ||
Sbjct 8234892 AGAGGGTCGTGCCAACCGAACGGTTAAGGCTCAATCCTTGTGGTTCGCCATTATTGAGGC 8234833
Query 53869 CCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAA 53928
||||| || || |||| || |||||| | |||||| | |||| |||||||||
Sbjct 8234832 ACAGGTCGAAACTGGAAACCCCTACATGCTGTTTAAGGATGCCTGCAACAGGAAGAGCAA 8234773
Query 53929 CCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTATG 53967
|||| |||| ||||| |||||| | |||||||| ||
Sbjct 8234772 CCAGCAGAATGTCGGCACCATCAAGTGCAGCAACTTGTG 8234734
Score = 86.0 bits (94), Expect = 7e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|| ||||||||| | || ||||| ||||| || ||||| || || || || |||||||||
Sbjct 8234240 CGGAACTCCCTGTTGGTTGCGCCTATGCCCACTGCGTCCACTGCCCAAATTATGGGCAAC 8234181
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTA 55578
||||| | |||||||||||||| || || || ||
Sbjct 8234180 AACGAATCTTTCGAGCCGTACACAACGAATATTTA 8234146
>seq5238
Length=3592495
Score = 109 bits (120), Expect = 6e-19
Identities = 196/281 (70%), Gaps = 9/281 (3%)
Strand=Plus/Plus
Query 158944 AACTCGCGGATGCTGTGCGTCTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGT 159003
|||||||| | |||||||| ||||| || ||||| || |||| ||| | |
Sbjct 398510 AACTCGCGCACACTGTGCGTTTCTCCCGTGGCAATGACGTAGTCGGAGGGAGAGTCGCGC 398569
Query 159004 TGGAGCATGAGCCACATGGCCTCGACGTAATC-CTGCGCGTGACCCCAGTCGCGCTTGGC 159062
|| ||||| | |||||||||||| |||||||| ||| ||||| ||||||||||| || |
Sbjct 398570 TGCAGCATCATCCACATGGCCTCCACGTAATCGCTG-GCGTGTCCCCAGTCGCGTTTCGA 398628
Query 159063 ATCCATGTTCCCGAGCTCGATGACTTTTCCA--GACTTTTTCCA---CTCAGCCAGACCG 159117
|||| || || ||||||| | | |||| ||| | | || |||| | |
Sbjct 398629 GTCCAGATTGCCCAGCTCGA--AGTACTCCATTTGCTTGTGATAGATCTTGGCCACGCTG 398686
Query 159118 AGCGTGATCTTGCGCGTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGA 159177
| ||||| || | |||||||| | | || || ||| ||| ||||| |||||
Sbjct 398687 CGGGTGATTTTCCTGGTCACAAAGTTCTCGCCACGTCGTGGGCTCTCGTGGTTGAACAGG 398746
Query 159178 ATGCCGGTACAAGCGAACAGGTTATAGGACTCGCGGTAATT 159218
||||| | |||||| ||| ||| |||| ||||||||| ||
Sbjct 398747 ATGCCATTGCAAGCGTACATGTTGTAGGCCTCGCGGTAGTT 398787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547178221575400
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