Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq5165 187 2e-42
seq5396 104 2e-17
>seq5165
Length=2344106
Score = 187 bits (206), Expect = 2e-42
Identities = 429/643 (67%), Gaps = 10/643 (2%)
Strand=Plus/Plus
Query 29825 TTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCC 29884
|| ||| ||| |||| ||||| | ||| | ||| ||||| | | ||||| |||
Sbjct 2001989 TTGATCACCAGCTTGGGGAAGGGCCGCGGCGTGCGCTCCAGCTGCTCCCTTAGCGGCTCC 2002048
Query 29885 ACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGC 29944
|||| | ||| |||||||| | ||| |||| | |||| ||||| || || || | ||
Sbjct 2002049 ACGTGGTTCAGATAGACGTGCGTGTCGCCCATGGTGTGCACAAAGTCGCCGGGCTTCAGG 2002108
Query 29945 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 30004
|| || || || || ||||||| ||||| || | |||| ||||||||| ||||| ||
Sbjct 2002109 CCCGTCACATGGGCGATCATGTGGGTGAGCAGGGCGTAGGAGGCGATGTTGAAGGGCACG 2002168
Query 30005 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC--- 30061
|| || |||||||| | ||| ||||| ||||| || |||||||| ||| ||| |
Sbjct 2002169 CCCAGGCCCATGTCGGCGCTCCTTTGGTACAGCTGGCAGGAGAGCTCACCG-CGCGCCTG 2002227
Query 30062 ----ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTT 30117
|| || ||||| || | ||||||||| ||||| ||||| | |||
Sbjct 2002228 CGAGACATAGAACTGGGCCAGGCAGTGGCACGGCGGAAGGGCCATCTTTGGTATGTCGAG 2002287
Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 30177
||| |||||||| ||| ||||||||||||||| || || ||| |||| ||| |
Sbjct 2002288 GGGATTCCAGGCCGACATGATGATGCGCCTGTCCGAGGGATTCTTCTTGATCGTGTCGAT 2002347
Query 30178 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTGTACT 30236
| | ||| ||| || | ||| | || ||| || | | || || | |||||
Sbjct 2002348 CACCTGGCGCAACTGGTCGATGCCCTTGCCGCTGTAATCGTCGTCGCAGGTGC-CGTACT 2002406
Query 30237 CTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 30296
| || || || || | ||||||||| ||||| ||||| |||||||| || | | | |
Sbjct 2002407 CGGCCCCAAAGTGACGCCACTGGAAGCCGTAAACCGGGCCCAGGTCGCCGACGGCGCGCT 2002466
Query 30297 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 30356
| | ||| ||||||| || || |||| | ||| |||||||||| | ||
Sbjct 2002467 CCGTGTGCCCCAGTTTGTCCAGGAACTCCCTGGTGCTGTTCTCGTCCCAGATGTGCACGT 2002526
Query 30357 CCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30416
||| | ||| |||| || || || |||||||| | |||||||||
Sbjct 2002527 TCTTGGCCTGCAGCAGCTTGGCGTCCGTCTTGCCGGCCACGAACCAGATCAGCTCCTCGG 2002586
Query 30417 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 30459
| ||| | | ||||| | |||||| || || ||||||||
Sbjct 2002587 CCACGCCGCGGAAGAAGACGCGCTTGGTGGTCAGCAGGGGAAA 2002629
>seq5396
Length=9561034
Score = 104 bits (114), Expect = 2e-17
Identities = 117/157 (75%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 49127 GTTAAACAGTATGACGCCGAGGTTGCCCCTGTAGTCGGGGTCCACCACCCCGGCACCGAC 49186
||| ||||| | ||| ||||||||||| | ||||| ||||||||| |||||||| ||
Sbjct 2096245 GTTGAACAGGACGACTCCGAGGTTGCCGCGATAGTCCTCGTCCACCACGCCGGCACCCAC 2096304
Query 49187 GTCTATAAAATTTTTCAGGGCCAGGCCGGACCTGGGAGCCACCCTGCCGTAGAGGCCCGG 49246
|| || || || |||| |||||| || || | |||||||| | |||||| ||||
Sbjct 2096305 ATCGATGAAGTTCTTCACGGCCAGCCCTGATCGCGGAGCCACTCGTCCGTAGGAGCCCTC 2096364
Query 49247 GGGCATCTTCACGGCCAGGTCCGTCTTTACCAGGGCC 49283
||| | || ||| |||||| ||||| || | ||||
Sbjct 2096365 GGGAACCTGCACTTGCAGGTCGGTCTTCACGATGGCC 2096401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406283050612116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |