Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq5402 154 1e-32
seq4493 143 2e-29
seq5396 140 3e-28
seq5238 125 6e-24
seq5395 123 2e-23
>seq5402
Length=10656099
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||| ||||||||||| | || || || || ||||| || ||
Sbjct 571637 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCATCT 571578
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || ||||| || || || || || |||||
Sbjct 571577 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAG 571518
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| || | || ||| | || |||| |||||||||
Sbjct 571517 CAGCGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACTCTTTCTGATTACAAC 571458
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||||| ||||||||| | ||| |||| ||||| ||
Sbjct 571457 ATCCAGAAGGAGTCGACCTTGCATTTGGTTCTCCGTCTGCGAGGTGGAAT 571408
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | ||||| | || ||||| || |||
Sbjct 571865 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAGCCCTCC 571806
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||||| || || || || || ||||| || ||||| || || |||||
Sbjct 571805 GACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 571746
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||||||||| ||| |||| ||| | ||| | ||||| ||||||
Sbjct 571745 CAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTGTCCGACTACAAC 571686
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||||||| | || ||||| | ||| |||| ||||| ||
Sbjct 571685 ATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTGCGCGGTGGTAT 571636
>seq4493
Length=3184771
Score = 143 bits (158), Expect = 2e-29
Identities = 186/257 (72%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 135476 TGGAACGCGGCACAACGGCAGCTTAAGCGAGAAGGCAAAATGCACGGATTTATGCGCATG 135535
|||||| |||| || | |||||| ||| || ||||| |||||||| ||| ||||||||
Sbjct 604558 TGGAACTCGGCGCAGCTGCAGCTGGTGCGCGAGGGCAAGATGCACGGCTTTCTGCGCATG 604499
Query 135536 TATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACACGCA 135595
|| ||||| || ||||| | || ||| | || | |||| |||||||| || | ||
Sbjct 604498 TACTGGGCCAAGAAGATTCTCGAGTGGACCGCCACCCCTGAGGAGGCGCTGGAATATGCG 604439
Query 135596 ATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTTGT 135655
|| | | || || | ||||| | || ||||||||| | || ||||| || || ||
Sbjct 604438 ATCCTGCTAAACGACAAGTACAGCCTCGACGGACGCGATCCCAACGGCTATGTCGGCTGC 604379
Query 135656 ATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGCAAG 135715
|||||||| ||| | || || ||||| || ||||||||||| | || ||||||
Sbjct 604378 ATGTGGTCCATTGGGGGAGTCCACGACATGGGCTGGAAGGAGCGGGCCATCTTCGGCAAG 604319
Query 135716 ATTCGCTATATGAACTA 135732
| || |||||||||||
Sbjct 604318 GTGCGATATATGAACTA 604302
>seq5396
Length=9561034
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || || ||||| || ||||| ||
Sbjct 8330851 ATGCAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACGCTTGAGGTCGAACCTTCG 8330910
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || ||||| ||||||||||| || || || |||||
Sbjct 8330911 GATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 8330970
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| ||||| || ||||||| | ||| | || || || |||
Sbjct 8330971 CAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAAC 8331030
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| || || || ||||| ||||| |||| |||||
Sbjct 8331031 ATTCAGAAGGAGTCCACTTTGCACTTGGTGCTGCGTCTGCGTGGTGG 8331077
>seq5238
Length=3592495
Score = 125 bits (138), Expect = 6e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045
||||||| || || || ||||| || ||||||||| | || || | || ||||| || |
Sbjct 2679232 CCATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTT 2679291
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
| ||| | || |||| || || || || || ||||| || ||||| || || ||||
Sbjct 2679292 CGGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATC 2679351
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| |||||| | || | ||||||||| || |||| ||| | ||| | ||||| ||||
Sbjct 2679352 AGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCCGACTACA 2679411
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||| || |||||||||||| | || |||| | || | || ||||| ||
Sbjct 2679412 ACATCCAGAAGGAGTCGACCCTCCACCTGGTGCTCCGCCTACGCGGTGGTAT 2679463
>seq5395
Length=2659632
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || || || || || ||||| |||||| | || || ||||| || || || ||
Sbjct 975986 CATGCAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTC 975927
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|||| | || |||| || || || || || ||||| || || || || || || ||
Sbjct 975926 CGACACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCA 975867
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | |||||| || || |||| ||| | ||| | |||||||||||
Sbjct 975866 GCAGCGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGATTACAA 975807
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | || ||||| | || | || ||||||||
Sbjct 975806 CATCCAGAAGGAGTCCACCCTCCACTTGGTGCTCCGCCTCCGTGGTGGCAT 975756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434888374320960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |