Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq5266 84.2 7e-12 >seq5266 Length=3715358 Score = 84.2 bits (92), Expect = 7e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 22219 CCAGGGCTGGTCCGGCGTCGGCTACAACTTCGTGGTCGACCAGGAGGGCAACATCTACGA 22278 || ||||||| ||| | |||||||||||||| || ||| | || |||||| ||||||| Sbjct 2528600 CCTGGGCTGGCCCGACATCGGCTACAACTTCCTGATCGGCGGCGACGGCAACGTCTACGA 2528659 Query 22279 GGGCCGTGGCTGGAAC 22294 |||||||||||||||| Sbjct 2528660 GGGCCGTGGCTGGAAC 2528675 Score = 84.2 bits (92), Expect = 7e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 22219 CCAGGGCTGGTCCGGCGTCGGCTACAACTTCGTGGTCGACCAGGAGGGCAACATCTACGA 22278 || ||||||| ||| | |||||||||||||| || ||| | || |||||| ||||||| Sbjct 2533394 CCTGGGCTGGCCCGACATCGGCTACAACTTCCTGATCGGCGGCGACGGCAACGTCTACGA 2533453 Query 22279 GGGCCGTGGCTGGAAC 22294 |||||||||||||||| Sbjct 2533454 GGGCCGTGGCTGGAAC 2533469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160395879646002