Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_028888.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq1837 104 6e-18 >seq1837 Length=1243 Score = 104 bits (114), Expect = 6e-18 Identities = 154/213 (72%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 29688 CTTTTTAGTACAGCTTTTACTGTTAGTCCTTTTAACTTGAT-AGTGCCAAGAAGCTTATT 29746 |||| || ||| ||||||| || | |||||| || || | | |||| || || || Sbjct 33 CTTTGTACCACATCTTTTACCGTACGCCCTTTTGTTTTAATGATTCCCAATAAT-TTGTT 91 Query 29747 CTTATTCATGTAATCACCTCGTTTCCTTTAGGACACTTTCATTaaaacatcaaaaagtac 29806 ||| ||||| | ||||||||||||||||||||||||| ||||||||| | | | | | Sbjct 92 CTTGTTCATATCGCCACCTCGTTTCCTTTAGGACACTTTAATTAAAACACCTATATTTGC 151 Query 29807 agttgtcaacacaaaaacgtccaaaaaagaaacTTTTTTCGTT----CTCCATTGCTTAT 29862 ||||||||| ||| |||| |||| |||||||||| || || | ||| Sbjct 152 TAATGTCAACACCAAAGTGTCC-TAAAATAAACTTTTTTATTTTAAAGCACACT-AATAT 209 Query 29863 GCGTATTTTAAGACACATTCGTGCTATTATGTA 29895 | || |||||||||||| |||||||||||| Sbjct 210 GTATACTTTAAGACACATAAATGCTATTATGTA 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126186923408936