Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_028911.1 Length=34176 Score E Sequences producing significant alignments: (Bits) Value seq1837 95.1 3e-15 >seq1837 Length=1243 Score = 95.1 bits (104), Expect = 3e-15 Identities = 153/213 (72%), Gaps = 9/213 (4%) Strand=Plus/Plus Query 26080 CTTTTTAGTACAGCTTTTACTGTTAGTCCTTTTAACTTGAT-AGTGCCAAGAAGCTTATT 26138 |||| || ||| ||||||| || | |||||| || || | | |||| || || || Sbjct 33 CTTTGTACCACATCTTTTACCGTACGCCCTTTTGTTTTAATGATTCCCAATAAT-TTGTT 91 Query 26139 CTTATTCATGTAATCACCTCGTTTCCTTTAGGACACTTTCATTaaaacatcaaaaagtac 26198 ||| ||||| | ||||||||||||||||||||||||| ||||||||| | | | | | Sbjct 92 CTTGTTCATATCGCCACCTCGTTTCCTTTAGGACACTTTAATTAAAACACCTATATTTGC 151 Query 26199 agttgtcaacacaaaaaacgtccaaaaaagaaacTTTTTTCGTT----CTCCATTGCTTA 26254 ||||||||| ||| |||| |||| |||||||||| || || | || Sbjct 152 TAATGTCAACAC-CAAAGTGTCC-TAAAATAAACTTTTTTATTTTAAAGCACACT-AATA 208 Query 26255 TGCGTATTTTAAGACACATTCGTGCTATTATGT 26287 || || |||||||||||| ||||||||||| Sbjct 209 TGTATACTTTAAGACACATAAATGCTATTATGT 241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109234435321388