Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq5395 140 8e-28
seq5238 140 8e-28
seq5345 132 1e-25
seq4083 129 1e-24
seq4028 129 1e-24
seq5451 123 6e-23
seq4984 123 6e-23
seq5402 122 2e-22
seq5396 118 3e-21
seq2426 118 3e-21
seq5386 116 9e-21
seq1452 102 2e-16
seq5433 86.0 1e-11
seq5443 84.2 5e-11
>seq5395
Length=2659632
Score = 140 bits (154), Expect = 8e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | |||||| ||||| || || |||| |||||||||| || || | || ||
Sbjct 975774 AGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGACAGGGTGCGTCCGTCC 975833
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || ||||| || || || || ||||||||
Sbjct 975834 TCCAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATTCCCTCCTTGTCC 975893
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| |||| || || || | ||||| |||
Sbjct 975894 TGGATCTTGGCCTTAACATTCTCGATGGTGTCGGAGGGCTCGACCTCAAGGGTGATGGTC 975953
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| |||| || || | ||| | |||||| ||
Sbjct 975954 TTGCCAGTCAGGGTCTTCACGAAAATTTGCATGTT 975988
>seq5238
Length=3592495
Score = 140 bits (154), Expect = 8e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || |||||||| || || || || |||| ||||| |||| || || | || ||
Sbjct 2679445 AGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 2679386
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || || || || || || || || || ||||||||
Sbjct 2679385 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGGATGCCCTCCTTGTCC 2679326
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||||||| ||||||||||| || | ||||| || || ||||| |||
Sbjct 2679325 TGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACCTCCAAGGTGATGGTC 2679266
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||||| | ||| | ||||||
Sbjct 2679265 TTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 2679234
>seq5345
Length=5870
Score = 132 bits (146), Expect = 1e-25
Identities = 130/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| |||| || || ||| |||| || ||||| ||| |||| ||||| ||| | || ||
Sbjct 4724 CAAATTTATAATGTAATTGTTACTGCCCATGCTTTTATTATAATTTTTTTTATAGTAATA 4665
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || || || ||||||||||| || || ||||| | || |||||||||
Sbjct 4664 CCTATTATAATTGGAGGGTTTGGAAATTGATTAGTACCATTAATATTAGGAGCTCCTGAT 4605
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
|| || |||||| | | || |||||||| |||||||||||||| |||
Sbjct 4604 ATAGCATTTCCACGAATAAATAATATAAGATTTTGATTACTACCTCCT 4557
Score = 87.8 bits (96), Expect = 4e-12
Identities = 75/93 (81%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||||||||| ||||||||||| ||||||||||| || | || || || ||||| |
Sbjct 4147 ATACTTCAGGATGTCCAAAAAATCAAAATAAATGTTGGTATAAAATTGGGTCTCCTCCTC 4206
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTC 370760
| | ||| |||||||| |||||| |||||||
Sbjct 4207 CAGCTGGGTCAAAAAATGAAGTATTTAAATTTC 4239
>seq4083
Length=2605
Score = 129 bits (142), Expect = 1e-24
Identities = 130/168 (77%), Gaps = 1/168 (1%)
Strand=Plus/Plus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| |||| || || ||| |||| || ||||| ||| |||| ||||| ||| | || ||
Sbjct 904 CAAATTTATAATGTAATTGTTACTGCCCATGCTTTTATTATAATTTT-TTTATAGTAATA 962
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || || || ||||||||||| || || ||||| | || |||||||||
Sbjct 963 CCTATTATAATTGGAGGGTTTGGAAATTGATTAGTACCATTAATATTAGGAGCTCCTGAT 1022
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
|| || |||||| | | || |||||||| |||||||||||||| |||
Sbjct 1023 ATAGCATTTCCACGAATAAATAATATAAGATTTTGATTACTACCTCCT 1070
Score = 89.7 bits (98), Expect = 1e-12
Identities = 86/108 (80%), Gaps = 3/108 (3%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||||||||| ||||||||||| |||||||||||||| | || || || ||||| |
Sbjct 1477 ATACTTCAGGATGTCCAAAAAATCAAAATAAATGTTGATATAAAATTGGGTCTCCTCCTC 1418
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774
| | || |||||||| ||||||||| ||| ||| ||||| ||||
Sbjct 1417 CAGCCGGGTCAAAAAATGAAGTATTAAA--TTCGATCTGTTAATAACA 1372
>seq4028
Length=1000
Score = 129 bits (142), Expect = 1e-24
Identities = 130/168 (77%), Gaps = 1/168 (1%)
Strand=Plus/Plus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| |||| || || ||| |||| || ||||| ||| |||| ||||| ||| | || ||
Sbjct 5 CAAATTTATAATGTAATTGTTACTGCCCATGCTTTTATTATAATTTT-TTTATAGTAATA 63
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || || || ||||||||||| || || ||||| | || |||||||||
Sbjct 64 CCTATTATAATTGGAGGGTTTGGAAATTGATTAGTACCATTAATATTAGGAGCTCCTGAT 123
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
|| || |||||| | | || |||||||| |||||||||||||| |||
Sbjct 124 ATAGCATTTCCACGAATAAATAATATAAGATTTTGATTACTACCTCCT 171
Score = 93.3 bits (102), Expect = 1e-13
Identities = 87/108 (81%), Gaps = 2/108 (2%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||||||||| ||||||||||| |||||||||||||| | || || || ||||| |
Sbjct 579 ATACTTCAGGATGTCCAAAAAATCAAAATAAATGTTGATATAAAATTGGGTCTCCTCCTC 520
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774
| | || |||||||| |||||| ||||||| ||| ||||| ||||
Sbjct 519 CAGCCGGGTCAAAAAATGAAGTATT-AAATTTCGATCTGTTAATAACA 473
>seq5451
Length=13055
Score = 123 bits (136), Expect = 6e-23
Identities = 129/168 (77%), Gaps = 1/168 (1%)
Strand=Plus/Plus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| |||| || || ||| |||| || ||||| ||| |||| ||||| ||| | || ||
Sbjct 546 CAAATTTATAATGTAATTGTTACTGCCCATGCTTTTATTATAATTTT-TTTATAGTAATA 604
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || || || ||||||||||| || || ||||| | || |||||| ||
Sbjct 605 CCTATTATAATTGGAGGGTTTGGAAATTGATTAGTACCATTAATATTAGGAGCTCCTTAT 664
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
|| || |||||| | | || |||||||| |||||||||||||| |||
Sbjct 665 ATAGCATTTCCACGAATAAATAATATAAGATTTTGATTACTACCTCCT 712
>seq4984
Length=4808
Score = 123 bits (136), Expect = 6e-23
Identities = 129/168 (77%), Gaps = 1/168 (1%)
Strand=Plus/Minus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| |||| || || ||| |||| || ||||| ||| |||| ||||| ||| | || ||
Sbjct 1077 CAAATTTATAATGTAATTGTTACTGCCCATGCTTTTATTATAATTTT-TTTATAGTAATA 1019
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || || || ||||||||||| || || ||||| | || |||||| ||
Sbjct 1018 CCTATTATAATTGGAGGGTTTGGAAATTGATTAGTACCATTAATATTAGGAGCTCCTTAT 959
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
|| || |||||| | | || |||||||| |||||||||||||| |||
Sbjct 958 ATAGCATTTCCACGAATAAATAATATAAGATTTTGATTACTACCTCCT 911
>seq5402
Length=10656099
Score = 122 bits (134), Expect = 2e-22
Identities = 136/182 (75%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576
|| || || || |||| |||||||| | | ||| | || || || |||||||| ||
Sbjct 571441 GTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGTCCGTCCTCGAGCTGCTTGCCG 571500
Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636
|||||||| || || || || || || ||||| || |||||||| |||||||| ||||
Sbjct 571501 GCGAAGATCAGACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGGATCTTGGCCTTC 571560
Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696
|| ||||||||||| || | ||||| || | ||||| |||||||| ||||||||
Sbjct 571561 ACGTTCTCGATGGTGTCAGATGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAAAGTC 571620
Query 225697 TT 225698
||
Sbjct 571621 TT 571622
>seq5396
Length=9561034
Score = 118 bits (130), Expect = 3e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | ||| | |||||| || || || | || || || | | ||
Sbjct 8331072 ACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGT 8331013
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| |||||||| ||||||||||| || || || || || || ||||| ||
Sbjct 8331012 GCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATTCC 8330953
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||| ||||| || ||||| || ||| |||||| || || || | ||| || || |
Sbjct 8330952 TTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGACCTCAAG 8330893
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTTATG 225719
|||||| ||||||||||| | || || | ||| | ||||| || ||
Sbjct 8330892 CGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTTGTG 8330845
>seq2426
Length=8015
Score = 118 bits (130), Expect = 3e-21
Identities = 138/184 (75%), Gaps = 2/184 (1%)
Strand=Plus/Plus
Query 7536 ATTGAGTGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGAT 7595
|||| |||| || |||| |||| || || ||| |||| || ||||| ||| |||| ||
Sbjct 3630 ATTG-GTGGGGATGACCAAATTTATAATGTAATTGTTACTGCTCATGCTTTTATTATAAT 3688
Query 7596 TTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAAT 7655
||| ||| | || || || |||| || | || || ||||||||||| || | |||||
Sbjct 3689 TTT-TTTATAGTAATACCATTTATAATTGAAGGATTTGGAAATTGATTAGTACTATTAAT 3747
Query 7656 GATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715
| | || ||||| |||| || |||||| | | || |||||||| ||||||||||||||
Sbjct 3748 GTTAGGAGCTCCATATATAGCATTTCCACGAATAAATAATATAAGATTTTGATTACTACC 3807
Query 7716 GCCT 7719
|||
Sbjct 3808 TCCT 3811
>seq5386
Length=120146
Score = 116 bits (128), Expect = 9e-21
Identities = 128/169 (76%), Gaps = 1/169 (1%)
Strand=Plus/Plus
Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610
|||| |||| ||| | ||| |||| || ||||| ||| ||| ||||| ||| | || ||
Sbjct 13567 CCAAATTTATAACATAATTGTTACTGCACATGCTTTTACTATAATTTT-TTTATGGTAAT 13625
Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670
|| |||| || || || || | ||||||||| || || ||| || | || ||||| ||
Sbjct 13626 ACCAATTATAATTGGAGGATTTGAAAATTGATTAGTACCATTATTGTTAGGAGCTCCAGA 13685
Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
||| || |||||| | | || |||||||| |||||||||||||| |||
Sbjct 13686 TATAGCATTTCCACGAATAAATAATATAAGATTTTGATTACTACCTCCT 13734
>seq1452
Length=3931
Score = 102 bits (112), Expect = 2e-16
Identities = 100/128 (78%), Gaps = 1/128 (1%)
Strand=Plus/Plus
Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795
||||||| |||| ||||| || ||||||||||||| ||||||||||| | | |
Sbjct 2906 TGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 2965
Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG-AATATTTACGC 7854
|||||| || |||||||||| |||||||||| |||| | | |||| || | || ||||
Sbjct 2966 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGTACTCCCCAGGCGGTCAACTTCACGC 3025
Query 7855 GTTAGCTT 7862
||||||||
Sbjct 3026 GTTAGCTT 3033
Score = 89.7 bits (98), Expect = 1e-12
Identities = 85/105 (81%), Gaps = 3/105 (3%)
Strand=Plus/Minus
Query 6768 TGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GGCAG 6825
|||||| | || |||||||| ||||||||| | |||||||| | || ||| | |||||
Sbjct 3595 TGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGGCAG 3537
Query 6826 CAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGAGTAATG 6870
|||||| |||| || ||||||||||| |||| ||||| || ||||
Sbjct 3536 CAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCAATG 3492
>seq5433
Length=12700
Score = 86.0 bits (94), Expect = 1e-11
Identities = 120/163 (74%), Gaps = 9/163 (6%)
Strand=Plus/Minus
Query 7557 TTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGT 7616
||| || || ||| |||| || ||||| || |||| ||||| | || || || |
Sbjct 2693 TTATAATGTAATTGTTACTGCCCATGC--TTATTATAATTTTATA----GTAATACCTAT 2640
Query 7617 TATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGC 7676
||| || || || || ||||||||||| || || ||||| | || ||||||||||| ||
Sbjct 2639 TATAATTGGAGGGTT-GGAAATTGATTAGTACCATTAATATTAGGAGCTCCTGATATAGC 2581
Query 7677 TTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
||||| | | || |||||||| ||||||||||||| |||
Sbjct 2580 -ATTCCACGAATAAATAATATAAG-ATTTGATTACTACCTCCT 2540
>seq5443
Length=21803
Score = 84.2 bits (92), Expect = 5e-11
Identities = 84/108 (78%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| |||||| || ||||||||||| ||||||||||| || | || || || ||||| |
Sbjct 21326 ATACTTCAGGGTGTCCAAAAAATCAAAATAAATGTTGGTATAAAATTGGGTCTCCTCCTC 21385
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774
| | || |||||||| |||||| ||||||| || ||||| ||||
Sbjct 21386 CGGCTGAGTCAAAAAATGAAGTATTTAAATTTCGGTCTGTTAATAACA 21433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192446812392962
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