Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5396 408 6e-109 >seq5396 Length=9561034 Score = 408 bits (452), Expect = 6e-109 Identities = 1232/1886 (65%), Gaps = 36/1886 (2%) Strand=Plus/Plus Query 76770 TTCTTATCCAATGTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATA 76829 |||||||||| || |||||||| | | || || ||||| || || |||||||| Sbjct 8233756 TTCTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATT 8233815 Query 76830 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTA 76889 |||||||| ||||| |||| ||||| || ||| || ||||| ||| | Sbjct 8233816 CCAGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTT 8233875 Query 76890 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 76949 || || || | |||||| || | ||||||||| ||||| ||||| ||||||| ||| || Sbjct 8233876 GGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCG 8233935 Query 76950 GCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA 77007 ||||| || || | | ||| |||| |||||||| | |||||| | | | || Sbjct 8233936 GCCATCTTAATGGTCGACTTCACTGAG--ATTTCCCACACTGTTTTGTACAGATCGCGGA 8233993 Query 77008 TATCATCTGG---AAGGTTTG--TATTTTGAATGGAACCACCATCTG-ATATAATTGTAT 77061 | ||||| | || | |||| || || || || || ||| | || ||| | Sbjct 8233994 CCT--TCTGGGGGATGGCCTCAATATTCTGGATTGAGCC-CCTGCTGGAAATGATTTGGT 8234050 Query 77062 TCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAA 77121 |||| || || || | |||||| | | ||| |||| | || | | |||| | |||| Sbjct 8234051 TCTTCATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAA 8234110 Query 77122 CTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCA 77181 | | ||| ||||| ||||||| |||| | || |||||||| | || || || || | Sbjct 8234111 CCACTTGGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGA 8234170 Query 77182 CAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATA 77241 |||||| ||||| |||| |||||| ||||| || ||||| |||||||| || ||||| | Sbjct 8234171 AAGATTCGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACA 8234230 Query 77242 AACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGA 77300 || | || ||| || || | |||| || || || | | ||| |||||||| Sbjct 8234231 GGGAGTTCCGGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGG 8234289 Query 77301 TCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGA--TC 77358 | || || || ||||| | ||||| || ||||| || || || || || || Sbjct 8234290 TTTGTCGGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCT--CACGGGACTTC 8234347 Query 77359 CATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTC 77418 | | ||| |||||||| || || || | | || ||||||||||| ||||||| || | Sbjct 8234348 CCTCATAGGTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGC 8234407 Query 77419 CGTAATAAATTGTTTCGAAAATCTTCTTATT---GAGATCTTGTGCTTCAATACTATCAA 77475 |||| || || |||||||| |||| || ||| |||| | ||||| ||| ||| Sbjct 8234408 CGTAGTAGATGGTTTCGAATATCTGCTGATTCAAGAGACC---GGCTTCTTCACTTTCAT 8234464 Query 77476 ACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTC 77535 | || || | | |||||| | ||| || || |||||||| || || || || | || | Sbjct 8234465 AGGGGAAACGCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGAC 8234524 Query 77536 TATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTT 77595 ||| ||| ||||| | || || ||||| | || || | || || || || || | Sbjct 8234525 GATGCCTCAAGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCT 8234584 Query 77596 TATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATC--AAATCT 77653 | || ||||| | ||| || || ||||| ||||| ||||| | ||| Sbjct 8234585 TGTTAAGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGTCT 8234644 Query 77654 TC-CATCTATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 || | | || |||||||| | || || ||||| | || || ||||| | ||| | Sbjct 8234645 TCTCGGGAGTGACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGT 8234704 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 | || || | | || || || || | || || || ||||| ||||| | || Sbjct 8234705 CCGGAGAGGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACAT 8234764 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 | || ||||||||||| | ||||| | |||||| | || || | || | || |||| Sbjct 8234765 TCTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTT 8234824 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATC 77892 | | ||||| || ||||| | ||| | | | ||| || | | | ||| | Sbjct 8234825 CGACCTGTGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGGCAC 8234884 Query 77893 GCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCA 77952 | | |||| ||||| | ||| | | ||| |||||||| ||||| ||||| | | Sbjct 8234885 GACCCTCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAA 8234944 Query 77953 ATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCA 78012 |||||||||| || || ||||| | |||||| || |||| ||| || || |||| Sbjct 8234945 GGCCAGGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCA 8235004 Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072 |||||||||| |||||||| || || || ||||| |||| | || || || || | Sbjct 8235005 TAAAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGC 8235064 Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132 | || ||||| ||||| || || ||||| | | || || ||||| || || || || | Sbjct 8235065 CGGTGTTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAA 8235124 Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192 | || | | || || || || ||||||||||| | ||| | || || || Sbjct 8235125 TGGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGA 8235184 Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 | || |||||||| |||| | || || || || || || || || |||| | | | Sbjct 8235185 AGACCCTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGC 8235244 Query 78253 CACTTGCGCGAATATTACTAATGGA----TATCCCTATTCCTCCTGCCATCTTAGATATT 78308 | |||| || || |||||| | || || || || ||| ||| || || Sbjct 8235245 CCTTTGCTCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATC 8235300 Query 78309 AGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGA 78368 | ||||| | | || | | | || ||||| || ||| | ||||| | | Sbjct 8235301 ATGGCGCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAG 8235360 Query 78369 AGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCA 78428 || ||||| |||| || | || || | || ||| | || || || ||| Sbjct 8235361 AGGAAACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCA 8235420 Query 78429 TGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCAT 78488 || || || || || || | || || || ||||| | |||| ||||| ||| | Sbjct 8235421 TGAGTGAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCTCT 8235480 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 ||| ||||| | ||| || |||||||||||||| || || | ||| | | || Sbjct 8235481 CCATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTTTTCCG 8235540 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608 ||| | |||| || || || ||| | || || || ||||||||||| || |||| Sbjct 8235541 TTTCTCTTCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACCCAAAG 8235600 Query 78609 TCTCTCTCGTAAATAATAACAGAATT 78634 || | ||||| || ||| ||| || Sbjct 8235601 TCGCGGTCGTAGATTATAGAAGAGTT 8235626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694620841802720