Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04] 5,523 sequences; 169,378,599 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq5396 423 3e-113 >seq5396 Length=9561034 Score = 423 bits (468), Expect = 3e-113 Identities = 1227/1877 (65%), Gaps = 34/1877 (2%) Strand=Plus/Plus Query 75365 TTCTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATA 75424 |||||||||| ||||||||||||| | ||||| ||||| || || |||||||| Sbjct 8233756 TTCTTATCCACGGTGAACTGAATGGCGTTTGCAGCTGGCTTTGTGCGCAGGTAGTACATT 8233815 Query 75425 CCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTC 75484 |||||||| ||||| |||| ||||| || ||| || ||||| ||| | Sbjct 8233816 CCAGTTTTGAGACCAGCTTTCCAGGAATAGAAGTGTATGGACGTGAGTTTTCCATAGTTT 8233875 Query 75485 GGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCC 75544 || || || | |||||| || | ||||||||| ||||| ||||| ||||||| ||| || Sbjct 8233876 GGCTCTGCCACATGAATGTTGAACGACTGACTCTGATCTATGAACGCTCCTCGATCTGCG 8233935 Query 75545 GCCATTTTTATAATGGTCTTT--TGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGA 75602 ||||| || || | | ||| |||| |||||||| | |||||| | | | || Sbjct 8233936 GCCATCTTAATGGTCGACTTCACTGAG--ATTTCCCACACTGTTTTGTACAGATCGCGGA 8233993 Query 75603 TATCATCTGGAAGATTTG-----TATTTTGAATGGATCCGCCATCAGATATAATTGTATT 75657 | ||||| ||| |||| || || || || | || || ||| || Sbjct 8233994 CCT--TCTGGGGGATGGCCTCAATATTCTGGATTGAGCCCCTGCTGGAAATGATTTGGTT 8234051 Query 75658 CTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAAC 75717 ||| || || || | |||||| | ||| |||| | || | | |||| | ||||| Sbjct 8234052 CTTCATGTCGTCGTCCCACAAGTCCAGCTCCGTTAGGTCCCTTAACAAATGATGGTTAAC 8234111 Query 75718 AATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCAC 75777 | ||| ||||| ||||||| |||| | || |||||||| | || || || || | Sbjct 8234112 CACTTGGAATTCGCCAGACAGAACTCGCCTGGTATAAATATTCGTTGTGTACGGCTCGAA 8234171 Query 75778 AGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAA 75837 |||||| ||||| |||| |||||| ||||| || ||||| |||||||| || ||||| | Sbjct 8234172 AGATTCGTTGTTGCCCATAATTTGGGCAGTGGACGCAGTGGGCATAGGCGCAACCAACAG 8234231 Query 75838 ACTATTTCTGAGACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGAT 75896 || | || ||| || || | |||| || || || | | ||| |||||||| | Sbjct 8234232 GGAGTTCCGGACACCGTGCTGCT-TGATGGACTCCTTCAGTTTCTGCCAGTCCCAAAGGT 8234290 Query 75897 CTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGA--TCC 75954 || || || ||||| | ||||| || ||||| || ||||| || || ||| Sbjct 8234291 TTGTCGGCACTTTGTCCCACATGTCGTACTGCAGAATGCCTTTGCT--CACGGGACTTCC 8234348 Query 75955 ATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACC 76014 | ||| ||||| || | ||||| | | || ||||| ||||| || || | || || Sbjct 8234349 CTCATAGGTTTCATATGGGCCGTCGATCTGGGCCAGTTCACAACTGGCTTCCAGGGCGCC 8234408 Query 76015 GTAATAAATTGTTTCGAAAATCTTCTTATT-AAGATCTTGCGCTTCAAGACTATCAAAAG 76073 ||| || || |||||||| |||| || ||| |||| | ||||| ||| ||| | | Sbjct 8234409 GTAGTAGATGGTTTCGAATATCTGCTGATTCAAGAGACCG-GCTTCTTCACTTTCATAGG 8234467 Query 76074 GATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTAT 76133 | || | | |||||| | || || || | |||||| || || || || | || | || Sbjct 8234468 GGAAACGCATAAGAATTAGGGCGTCAGCGAATCCCTGGACACCGATGCCCACGGGACGAT 8234527 Query 76134 GTCTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTAT 76193 | ||| ||||| | | || ||||| | ||||| | || ||||| || || || | Sbjct 8234528 GCCTCAAGTTGGATTTCTTTGCCTCTGGCAGGGGGTAGAAGTTTATATCGATGATCTTGT 8234587 Query 76194 TGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCAT 76253 | ||||| || ||| || || ||||| ||||| ||||| || | | | Sbjct 8234588 TAAGATTCTTGGTAACCGTCTTGGTAACTTCCTTAAGTTTCTTGAAATCGTATGT--CTT 8234645 Query 76254 CTA-----TCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATT 76308 || | || ||||| || || || || ||||| | || || || || | ||| | Sbjct 8234646 CTCGGGAGTGACGAACATGTTGAGGGCGATGGATGCCAAGTTGCAGACTGCAATCTCGTC 8234705 Query 76309 AGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATT 76368 | | || || | | || || ||||| | || || |||||||| || || | ||| Sbjct 8234706 CGGAGAGGAGTACTCCACGATTTCTGTGCACAAGTTGCTGCACTTGATGGTGCCGACATT 8234765 Query 76369 TTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTC 76428 || ||||||||||| |||| || | |||||| | || | | || |||||||||| Sbjct 8234766 CTGCTGGTTGCTCTTCCTGTTGCAGGCATCCTTAAACAGCATGTAGGGGTTTCCAGTTTC 8234825 Query 76429 AATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCG 76488 | ||||| || ||||| | ||| | | | ||| || | | ||| || Sbjct 8234826 GACCTGTGCCTCAATAATGGCGAACCACAAGGATTGAGCCTTAACCGTTCGGTTGGCACG 8234885 Query 76489 CTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548 |||| ||||| | ||| ||| ||| |||||||| ||||| ||||| | | Sbjct 8234886 ACCCTCTTGCTCATACTTCTCATACAACTTTTCGAATTCATCGCCCCACACATCGTGAAG 8234945 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 ||||| |||| || ||||||||| | |||||| || |||| ||| || || ||||| Sbjct 8234946 GCCAGGGCATTTATGCGGACACATTAGTGACCAATCTCCATTGGCCTCGACGCGCTTCAT 8235005 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 ||||||||| |||||||| || || || ||||| |||| | | || || || || Sbjct 8235006 AAAGAGATCGGGTATCCACAGGGCGTAGAACAGATCGCGGGCGCGATTCTCCTCCTTGCC 8235065 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 || ||||| ||||| || |||||||| | | || || ||||| || || || || || Sbjct 8235066 GGTGTTCTTCTTAAGTTCCAGGAACTCAAAGACGTCCGAGTGCCAGGGCTCCAGGTAAAT 8235125 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || || || ||||||||||| | ||| | || || || | Sbjct 8235126 GGCAAAGGCACCGGGACGCTTGCCGCCTCCCTGATCGACATAGCGCGCCACATTGTTGAA 8235185 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 || |||||||| |||| | ||| || || || || || || || |||| | | || Sbjct 8235186 GACCCTCAACATGGGAACCAGGCCATTGGAAGTGCCGTTCGTGCCGCAAATCGAGGTGCC 8235245 Query 76849 ACATGCACGAATATTACTAATAGA----TAGGCCTATTCCTCCTGCCATTTTAGAGATTA 76904 ||| || || ||| || || || || || || ||| || ||||| | Sbjct 8235246 CTTTGCTCGGAT----GCAATGGACGTTAAGTCCAATGCCGCCGGCCGACTTCGAGATCA 8235301 Query 76905 GAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAA 76964 || || | | || | | | | |||||||| || || | ||||| | | | Sbjct 8235302 TGGCGCACTGCTCCACGGACTTAAAAATGCCCTCGATGGAGTCGGCTGTCATGGTCAAGA 8235361 Query 76965 GAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCAT 77024 | ||||| |||| || | || || | || ||| | || || || |||| Sbjct 8235362 GGAAACAAGACGACAGCTGCGGGCGATTTGTGGCAGCGGCAAAAAGCGTTGGCGACGCAT 8235421 Query 77025 GAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATT 77084 ||||||| || || || | || || || ||||| | |||| ||||||||| | Sbjct 8235422 GAGTGAAGTATCGCTCCGACAAGAGGTTATAAGTTTCCACGGCTGCATCTATATCCTCTC 8235481 Query 77085 GATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTAT 77144 ||| ||||| | || || |||||||||||||| || || || || | | || | Sbjct 8235482 CATGGATTCCGATCGCCACGCGCATCAACATATGTTGCGGACGCTCAGCGATTTTTCCGT 8235541 Query 77145 TTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 77204 || | |||| || || || ||| | || || || ||||||||||| || ||||| Sbjct 8235542 TTCTCTTCAGCAGATAGGAACGTTCGAGGGTCTTGAACCCAAAATAGTTATACCCAAAGT 8235601 Query 77205 CTCTTTCGTAAATAATA 77221 | | ||||| || ||| Sbjct 8235602 CGCGGTCGTAGATTATA 8235618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712885180791360