Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5395 163 7e-35
seq5402 149 2e-30
seq5396 141 2e-28
seq5238 141 2e-28
>seq5395
Length=2659632
Score = 163 bits (180), Expect = 7e-35
Identities = 160/205 (78%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|||||||||||||| || || || || || || |||||||| ||||| || ||| |||
Sbjct 975982 CAAATTTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCCGAC 975923
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| |||||||| || |||||||| || ||||||||
Sbjct 975922 ACCATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCAG 975863
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || || ||| | || || ||||||| ||| ||
Sbjct 975862 CGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGATTACAACATC 975803
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 975802 CAGAAGGAGTCCACCCTCCA-CTTG 975779
Score = 150 bits (166), Expect = 4e-31
Identities = 157/205 (77%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || |||||||| ||||| || ||| ||
Sbjct 975754 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCTCCGAT 975695
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| |||||||| || |||||||| || ||||||||
Sbjct 975694 ACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCAGACCAGCAG 975635
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| ||||| || || ||| | || || |||| || ||| ||
Sbjct 975634 CGTCTGATCTTCGCCGGAAAGCAGCTGGAGGACGGACGCACCCTGTCCGACTACAACATC 975575
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || || || ||||
Sbjct 975574 CAGAAGGAGTCCACCCTCCA-CTTG 975551
>seq5402
Length=10656099
Score = 149 bits (164), Expect = 2e-30
Identities = 157/207 (76%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||| | || || || || |||||||| |||||||| || |||
Sbjct 571634 CAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCATCTGAC 571575
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||||||||| || ||||| |||||||| || ||||| || || || |||||
Sbjct 571574 ACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAGCAG 571515
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || ||| | |||||| | ||||| ||| ||
Sbjct 571514 CGTCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACTCTTTCTGATTACAACATC 571455
Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130
|| || || || || ||||| | |||
Sbjct 571454 CAGAAGGAGTCGACCTTGCATTTGGTT 571428
Score = 111 bits (122), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || || ||||| || | || || || || || ||| | ||||||||
Sbjct 571868 AAAATGC---AGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCTTGGAGGTGGAG 571812
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||| || ||||| || || ||||| |||||||| || || ||||| ||
Sbjct 571811 CCCTCCGACACGATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCA 571752
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|| ||||| || || ||||||||||| || || || || || ||| | || || ||||
Sbjct 571751 GATCAGCAGCGTCTGATCTTCGCCGGCAAGCAACTGGAGGACGGACGTACCCTGTCCGAC 571692
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
|| ||| |||| || || || || || || ||||
Sbjct 571691 TACAACATCCAGAAGGAGTCGACCCTTCA-CTTG 571659
>seq5396
Length=9561034
Score = 141 bits (156), Expect = 2e-28
Identities = 155/205 (76%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || || ||||| || ||||| ||| || ||
Sbjct 8330854 CAGATCTTCGTTAAGACCCTCACGGGCAAGACCATCACGCTTGAGGTCGAACCTTCGGAT 8330913
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || |||||| ||||||||||||||||||||||| ||||| || |||||
Sbjct 8330914 ACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAGCAG 8330973
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| |||||||| | || || | || |||||| |
Sbjct 8330974 CGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTATAACATT 8331033
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || |||| ||||
Sbjct 8331034 CAGAAGGAGTCCACTTTGCA-CTTG 8331057
>seq5238
Length=3592495
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||||||||| ||||| || || || |||||| | |||||||| || |||
Sbjct 2679237 CAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCTTGGAGGTGGAGCCTTCGGAC 2679296
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||||||||| || || ||||| |||||||| || || ||||| || || |||||
Sbjct 2679297 ACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAGCAG 2679356
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || | || || |||| || ||| ||
Sbjct 2679357 CGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACCCTGTCCGACTACAACATC 2679416
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 2679417 CAGAAGGAGTCGACCCTCCACCTGGT 2679442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203646019842462
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |