Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20biarmipes_20[refseq_20GCF_5F000233415.1_202013-03-04]
5,523 sequences; 169,378,599 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq5238 145 7e-30
seq5402 140 3e-28
seq5396 131 2e-25
seq5170 100 3e-16
>seq5238
Length=3592495
Score = 145 bits (160), Expect = 7e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| |||||||| || | |||||| || || || ||||||||| ||||| ||||||||
Sbjct 2679460 CCACCGCGTAGGCGGAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2679401
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| || ||||||||||||||||| ||||| ||||| || || | |||
Sbjct 2679400 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 2679341
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| || |||||||||| ||| || ||||| | | ||||| | |||||||
Sbjct 2679340 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCCGAAGGCTCCACC 2679281
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| || || || || || || || || || ||||| || ||||||
Sbjct 2679280 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCATG 2679233
>seq5402
Length=10656099
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | |||| || || || ||||||||| ||||| ||||||||
Sbjct 571639 CCACCGCGCAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 571698
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| || || |||||||||||||| ||||| ||||| || || | |||
Sbjct 571699 AGGGTACGTCCGTCCTCCAGTTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 571758
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| || |||||||||| ||| || ||||| | | |||||| | |||||||
Sbjct 571759 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATCGTGTCGGAGGGCTCCACC 571818
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| || || || ||||| |||| ||||| || || |||||||| ||
Sbjct 571819 TCCAAGGTAATGGTCTTACCAGTCAAGGTCTTCACAAAGATCTGCATTTT 571868
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| ||||| || ||||||||| ||||| || || ||
Sbjct 571411 CCACCTCGCAGACGGAGAACCAAATGCAAGGTCGACTCCTTCTGGATGTTGTAATCAGAA 571470
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| |||||||||||||||||||| ||||| ||||| || || | ||||
Sbjct 571471 AGAGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGA 571530
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815
| | |||||||||| ||| || ||||| | | ||||| | |||||||
Sbjct 571531 ATTCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCAGATGGCTCCACC 571590
Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || || || || |||| ||||| || || ||||||||
Sbjct 571591 TCCAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 571637
>seq5396
Length=9561034
Score = 131 bits (144), Expect = 2e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| |||| ||| ||||||||||||||||||||| |||
Sbjct 8331077 CCACCACGCAGACGCAGCACCAAGTGCAAAGTGGACTCCTTCTGAATGTTATAGTCAGAG 8331018
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||||||||| ||||| ||||| ||||| || || | |||
Sbjct 8331017 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 8330958
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | || |||||| ||| | || |||| || | | ||| || | || ||
Sbjct 8330957 ATTCCTTCTTTGTCC-TGAATCTTGGCTTTGACATTTTCGATAGTATCCGAAGGTTCGAC 8330899
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||| | ||| || || || ||||| || ||||| ||||| |||||||| ||
Sbjct 8330898 CTCAAGCGTGATGGTCTTGCCCGTGAGGGTCTTAACGAAGATCTGCATCTT 8330848
Score = 82.4 bits (90), Expect = 7e-11
Identities = 175/259 (68%), Gaps = 2/259 (1%)
Strand=Plus/Minus
Query 85787 GGGCTGCTACATTCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGT 85846
||||| |||| || | || || || || || || ||| ||| || ||||| ||
Sbjct 2096362 GGGCTCCTACGGACGAGTGGCTCCGCGATCAGGGCTGGCCGTGAAGAACTTCATCGATGT 2096303
Query 85847 GGGCGCCGGGGTCATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCA 85906
||| ||||| || | |||| ||||| ||||| ||| || |||| || ||||||||
Sbjct 2096302 GGGTGCCGGCGTGGTGGACGAGGACTATCGCGGCAACCTCGGAGTCGTCCTGTTCAACCA 2096243
Query 85907 CGGCGAAGAGGATCTGGTCGTGAGGCGAGGAGACAAGGTGGCCCAGTTCATCTGTGAAAA 85966
| || | || | | |||| ||| || ||| | ||||||||||| || |||
Sbjct 2096242 CTCGGACGTAGAGTTTGAGGTGAAGCGCGGCGACCGCATCGCCCAGTTCATTTGCGAACG 2096183
Query 85967 AATCCACTATTCCGACATACAAGAAGT-GACAACTCTGGACACCACCCAACGAGGACAAG 86025
||| |||| | || | || || ||||| ||||| |||| |||| || | |
Sbjct 2096182 CATCTTCTATCCGGAACTGCAGTTGGTGGACAA-ACTGGAGGACACCGAACGTGGCGAGG 2096124
Query 86026 GAGGATTCGGGTCCACCGG 86044
|||||||||||||||| ||
Sbjct 2096123 GAGGATTCGGGTCCACGGG 2096105
>seq5170
Length=6624210
Score = 100 bits (110), Expect = 3e-16
Identities = 219/326 (67%), Gaps = 4/326 (1%)
Strand=Plus/Minus
Query 49617 GCCGATGATGCCGCAGCCGAGTCTGCTGCCAGAGTTGCCGGTGATTTTGCTCTGCTCGTC 49676
|||||||| ||||||||| | | | || | ||| || ||| |||||| ||||||
Sbjct 512636 GCCGATGACGCCGCAGCCAATGCGGGCACCTGCGTTTCCCGTGGACTTGCTCAGCTCGTG 512577
Query 49677 GTCGCCCAGGCCAAAGTCGTCCTCCATGGCGTGCACCACGATGCTGCGCCCGAGAATGTT 49736
| | ||| |||| | || || | |||||| ||||| | | ||||||||| ||| |
Sbjct 512576 GCCACCCTGGCCGAGATCATCGGCATCGGCGTGGACCACAACGGTGCGCCCGATGATGCT 512517
Query 49737 GTGCGGGCCGAACAGCGACAGCATCGCGTCAAACGTGTCGAACAGGGT--GACGGTCGAG 49794
|| | ||||||||||| | | ||| ||| ||| || | ||| ||| ||| |
Sbjct 512516 GTCGGCGCCGAACAGCGTGATCTTCGAGTCGGTGATGTTGACCTTGGTGGGACAGTC--G 512459
Query 49795 CCGTCCGAGCACACGTTGCCCAGATCGCCGAGGTGACGCCGCGGGCTCGCGGGACCGCCG 49854
||| | | ||||||||| || || |||||||| | | |||||| | |||
Sbjct 512458 CCGGTGGCCTCGATGTTGCCCAGGTCTCCCAGGTGACGGTTCTCGTCGGCGGGAGCTCCG 512399
Query 49855 TGCGGCTGCCCGAACGGGTTCAGGTGCTCGCCTGCTGACGTGCACCCGTTCGAGGTGTCG 49914
||| || ||| | || || | |||| || | ||| |||| ||||| | | ||||
Sbjct 512398 TGCTCCTTGCCGTAGGGATTGAAGTGCGGTCCGGACGACATGCAGCCGTTGGTGTTGTCC 512339
Query 49915 CCGAATTCGTGGATGTGTATACCGTG 49940
||||| ||||| | ||| | |||||
Sbjct 512338 CCGAACTCGTGTACGTGGAATCCGTG 512313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462272083687600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |