Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq1082 87.8 2e-13 >seq1082 Length=18986 Score = 87.8 bits (96), Expect = 2e-13 Identities = 130/184 (71%), Gaps = 3/184 (2%) Strand=Plus/Minus Query 14515 ATATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCA 14574 |||||||| | | || || || ||||||||||| || || || || | ||| ||||| | Sbjct 10972 ATATTATGAAACAAGGTACTGTTAAATGGTTTAATGCTGACAAGGGTTATGGTTTTATTA 10913 Query 14575 CTTCAGAAGAAGGCAAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCA 14634 || | || || || ||| | |||| || | ||||| ||| | ||||| |||| Sbjct 10912 CTACTGATGATGGT---GATGTATTCGTACATTATTCAGCTATCAACAAGGATGGTTTCA 10856 Query 14635 AATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTTGAAGAAGGTCAACGTGGTCTTC 14694 | | ||||| ||||| |||| ||| || || ||||||||||| | ||||||| | Sbjct 10855 AGACCCTTGACGAAGGCGAAAAGGTTACTTTGGACGTTGAAGAAGGAGACCGTGGTCCCC 10796 Query 14695 AAGC 14698 |||| Sbjct 10795 AAGC 10792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48451318603000