Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5200 111 1e-19 >seq5200 Length=2197361 Score = 111 bits (122), Expect = 1e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 ||| | || || || ||||||||||| || || ||||| |||| || || ||||| Sbjct 1469253 GAACTCTCCTGCCAGCTGTATCAACGAAGTGCCGACATGGGCTTGGGAGTGCCCTTCAAC 1469312 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571 ||||| || || ||| | || ||||||||||| ||||| || | | | || | ||| Sbjct 1469313 ATTGCCTCCTACGCCCTGTTGACCTATATGATTGCTCATGTCACTGGTCTGAAGCCTGGT 1469372 Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCA 20615 ||||| || |||||||| |||||| ||||| ||||||| ||||| Sbjct 1469373 GACTTTGTTCACACCATGGGAGACACGCATGTTTACCTAAATCA 1469416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399157242197500