Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_002703.1 Length=38347 Score E Sequences producing significant alignments: (Bits) Value seq995 116 9e-22 >seq995 Length=30878 Score = 116 bits (128), Expect = 9e-22 Identities = 205/293 (70%), Gaps = 8/293 (3%) Strand=Plus/Plus Query 6519 ATGATTAATAATGTTGTA-TTAGTAGGTCGCTTAACTCGTGACCCTGAACTTAGACATAC 6577 |||||||||| || || ||| | || |||||||| || ||| ||| || | |||| Sbjct 6833 ATGATTAATACAGTAGTTCTTACT-GGACGCTTAACACGAGACGTTGA--TTTGCGATAC 6889 Query 6578 ACCACAGAA---CCAAGCAGTAGGTACATTTGGATTAGCTGTAAATCGCCAGTTTAAAAA 6634 ||| || || | ||||| ||||| ||| ||||||| | || | || | || Sbjct 6890 ACC-CAAAATGGCGCGGCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAA 6948 Query 6635 TGCGAATGGCGAACGTGAGGCTGATTTAATTAACTGCGTTATTTGGCGACAACAAGCCGA 6694 | ||||||| || || || ||||| || | ||||| |||||||||||| || ||| || Sbjct 6949 TTCGAATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGA 7008 Query 6695 AAATTTAGCTAAGTTTGCTAAAAAAGGAGCTTTGATTGGAATAACTGGACGGATTCAAAC 6754 ||| || || || || | | || || | | ||||||| || |||||||| || Sbjct 7009 AAACTTTGCCAACTTCGTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGAC 7068 Query 6755 AAGGAACTATGAGAACCAACAAGGACAAAAAGTTTATGTTACCGAAGTTGTTG 6807 | || || |||||| | || || ||| |||||||||||||||||| |||| Sbjct 7069 CCGAAATTACGAGAACAAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGTTG 7121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122580793419000