Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_004066.1 Length=36798 Score E Sequences producing significant alignments: (Bits) Value seq995 100 7e-17 >seq995 Length=30878 Score = 100 bits (110), Expect = 7e-17 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 8356 GCAGTTGCCACTTTTACTCTTGCAGTTAATCGAGCATTTAAAAACGCTAATGGAGAAAGA 8415 ||||||| |||||||| || || ||| | || || | || | ||||| || | Sbjct 6905 GCAGTTGGTACTTTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGG 6964 Query 8416 GAAGCTGACTTTATCAGTTGTGTTATTTGGGGTAAATCAGCCGAAAACTTGGCCAATTGG 8475 ||||||||||| ||| |||||||||||| | |||||||| |||||||| ||||| | Sbjct 6965 GAAGCTGACTTCGTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTC 7024 Query 8476 ACTCATAAAGGTCAATTAATTGGAGTTATTGGGAATATCCAGACTCGAAACTATGAGAAC 8535 ||||| ||| | | ||||| | || || ||||| ||||| || |||||| Sbjct 7025 GTGCATAAGGGTTCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAAC 7084 Query 8536 CAACAAGGGCAGCGTGTTTATATTACGGAGGTTGT 8570 | || || || || |||||| |||| || || || Sbjct 7085 AAGCAGGGCCAACGAGTTTATGTTACCGAAGTAGT 7119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117624317160000