Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq1322 89.7 6e-13 >seq1322 Length=29185 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/226 (69%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 7010 TAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTA 7069 ||| | || || || || || || ||||||||||||||||||||| || | | || | Sbjct 12291 TAAGCAGCTTGATTAGCCTGAGACCCGGAATGAGGTTGAACGTTTACGTATTCCGCACCA 12232 Query 7070 AACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCG 7129 || |||||||| || | | ||| || | |||| | | ||| | | | || || Sbjct 12231 AATAGTTCTTTTGCTCTATTAATGGCTAAAGTCTCAACCTTATCAACATACTCACATCCA 12172 Query 7130 CCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGT 7189 |||||||| || | || |||||||| || || ||||| ||||| |||| ||||| || Sbjct 12171 CCATAATATCGATGACCAGGATATCCTTCTGCGTACTTATTGGTTAAAACTGAACCTTGC 12112 Query 7190 GCTTTCATAACATCGTCTGACACATAGTTTTCGGACGCAATCAAGC 7235 || | |||| | | || || |||||||| ||||| |||| Sbjct 12111 GCAGCCCGAACACCCTTCGAAGCAATATTTTCGGAAGCAAT-AAGC 12067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555325018780000