Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq1322 114 1e-20 >seq1322 Length=29185 Score = 114 bits (126), Expect = 1e-20 Identities = 176/250 (70%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 6974 TCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGT 7033 || ||||| | || || ||| ||| ||||||| || ||||| || |||||||| ||| Sbjct 12315 TCACCTGGTTTTAGAAAAGCAGCATAAGCAGCTTGATTAGCCTGAGACCCGGAATGAGGT 12256 Query 7034 TGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCG 7093 ||||||||| || | | || ||| |||||||| || | | ||| || | |||| Sbjct 12255 TGAACGTTTACGTATTCCGCACCAAATAGTTCTTTTGCTCTATTAATGGCTAAAGTCTCA 12196 Query 7094 ATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATAC 7153 | || ||| | | |||| || || ||||| || | || |||||||| || || ||| Sbjct 12195 ACCTTATCAACATACTCACATCCACCATAATATCGATGACCAGGATATCCTTCTGCGTAC 12136 Query 7154 TTGTTGGTAAAAATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGAT 7213 || ||||| |||| ||||||||||| | |||| | | || || |||||||| Sbjct 12135 TTATTGGTTAAAACTGAACCTTGCGCAGCCCGAACACCCTTCGAAGCAATATTTTCGGAA 12076 Query 7214 GCAATCAAGC 7223 ||||| |||| Sbjct 12075 GCAAT-AAGC 12067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553315556940000