Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq995 266 9e-67 >seq995 Length=30878 Score = 266 bits (294), Expect = 9e-67 Identities = 564/835 (68%), Gaps = 10/835 (1%) Strand=Plus/Minus Query 26037 ACAAACAtttttttACCTTCTACATTTTTATGTTCGCCTTTTTGAAATTCAGATGCACTA 26096 || |||| || || || || || ||||| | | || |||||||||| |||||| | Sbjct 6174 ACTAACAACTTCTTTCCCTCCACGTTTTTGTAGGCACCCTTTTGAAATTGGGATGCAGAA 6115 Query 26097 CCAAAATATTCTTTATACTGTTTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTCG 26156 ||||| |||||||| || | || ||||| |||||| ||| ||| || || |||| Sbjct 6114 CCAAAGTATTCTTTGTATTCCTTCCCATCTTTTTCTACTTTTTGACCCGGAGACTCTTGA 6055 Query 26157 TGTGCCGCAAATAATGAACCAATCATGACCATTGATGCACCAAATCTAATTGACTTAGCG 26216 || ||||||| | || || |||||| ||||| |||||||| | ||| || || ||| Sbjct 6054 TGGCCCGCAAACATCGATCCGATCATGCACATTGTAGCACCAAAGCGAATCGATTTCGCG 5995 Query 26217 ATGTCGCCATGCGTTCTTATGCCACCATCGGCAATCAAAGGTTTACGAGCTGCTTTACTA 26276 ||||| |||| || | || || || || || || | ||||| | ||| |||| | Sbjct 5994 ATGTCACCATCGGTCCGAATCCCTCCGTCAGCGATGATGGGTTTTCTGGCTCCTTTCGCA 5935 Query 26277 CATATGTTTAATGCC-GCTAACTGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTGT 26335 || || |||| | |||| ||||| || || || |||||||| || |||||||| || Sbjct 5934 CA-ATAGCGAATGGCAGCTAGTTGCCATCCCCCGGTTCCAAAACCGGTCTTAATCTTAGT 5876 Query 26336 AATACAAACTCTACCAGGACCTATACCGACTTTGGTAGCATCAGCACCAGCATTTTCTAA 26395 || || | | || || || || ||||| ||||| || || ||||| |||||||| | Sbjct 5875 GATGCAGGCCTTTCCGGGTCCAATTCCGACCTTGGTGGCGTCCGCACCCGCATTTTCAAG 5816 Query 26396 TTCTCTAACACCTTCTGGCGTACCAACATTACCAGCAATAACAAAACTATCAGGTATATG 26455 | | | ||| ||||||| || ||||| || |||||||| | |||| | | || || | Sbjct 5815 TGCCCGAACGGCTTCTGGGGTTCCAACGTTTCCAGCAATCAGAAAAGTGTTGGGCATCCG 5756 Query 26456 GGTTTTAATATGTTTAATCATGTTTATCACTGAATCTGAGTGACCATGCGCAATATCTAT 26515 |||| ||||||||||| || || || || |||| ||| || ||||| || || Sbjct 5755 TTCCTTAACGAACTTAATCATGTTGATGACCGAGTCCGAGTAACCGTGGGCAATGTCAAT 5696 Query 26516 TGTAATATATTCGGGGATTAATTTTTCTTGAGCTAACTTTTCAATAAAATCAAATTCCGC 26575 || || ||||| || ||| | |||| | | | | ||| ||||| |||| Sbjct 5695 CGTGATGTATTCTGGAATTTGGTCGGCTTGGACCAGTTCCTTAATGAAATCGTATTCGTT 5636 Query 26576 TTTCTTTACACC--AACTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTTTTATA 26633 ||| || || |||| || || ||||||| || | ||||| | ||| | | Sbjct 5635 GGGCTTAACCCCGATACTG--ATGGAGGCAAATACCCCATCGTCATGCATTTTTTTCACA 5578 Query 26634 AAAGGTATTCTTGCTTCTTCATCAAAACGATGCATGATATAAAAGTAATCATTTTCAGCA 26693 ||| | | | |||| | |||||| ||||||| || |||||| |||||| ||| Sbjct 5577 AAATCAAGGCGTTTTTCTGGTTGAAAACGGTGCATGACGTAGAAGTAACCATTTTTAGCG 5518 Query 26694 AACCATTTCGCTAATTTCTCATTCATAACTGTTTGCATATTTGCAGGAACTACAGGTAGC 26753 | | | |||| | | || || || |||||||| || || || || || || | | Sbjct 5517 AGACTCTCGGCTAGGTCAGCGTTAATCACCGTTTGCATGTTAGCTGGTACGACCGGGATC 5458 Query 26754 TTGAATTTTTTCGG--ACCAAATTGGATAGTTGTATCACATTCTGATCTACTCTCAACTA 26811 ||||| || ||| ||||| | | | || |||||||| || | | ||| | Sbjct 5457 TTGAA--CTTACGGCCCCCAAACTCAACCGAAGTGTCACATTCGCTTCGAGAGTTAACCA 5400 Query 26812 TACATTTATTAGGTATTAATTGAATATCTTCATAGTCAAATATTTTCATTTTTAT 26866 ||| ||||| || || | |||||||||||| || ||||| | | |||||| || Sbjct 5399 CACACTTATTCGGAATCAGTTGAATATCTTCGTAATCAAACACGTCCATTTTCAT 5345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146624022993000