Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq5219 78.8 2e-11 >seq5219 Length=355110 Score = 78.8 bits (86), Expect = 2e-11 Identities = 100/138 (72%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 3343 CGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTG 3402 || |||||||| | |||| |||||| || |||||||||||||| || ||| | | Sbjct 99185 CGGGTCTTTCCGAAGGTCACCAAATGTACCTTCCACAAATACGGTCCCTCCGGCAACGTC 99126 Query 3403 GAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATT 3462 | | ||| || ||||| | || || ||| | ||||||||||||||||| | Sbjct 99125 CAGCGATTCGACGGTCTCTGTGTGCTGCCCCTCAACATTGTCAACGAGAAGATCTATGTG 99066 Query 3463 TTCCTCTGGTTCTGGTTC 3480 ||||| |||||||||||| Sbjct 99065 TTCCTGTGGTTCTGGTTC 99048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479249250000