Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq5403 84.2 5e-11 >seq5403 Length=2915140 Score = 84.2 bits (92), Expect = 5e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 || |||||||||| || | ||| ||| |||||||||||||| || ||||| | | Sbjct 122166 ATCGGCATGAACTGCGACTTGATGTCACAATACATCGAATTCGTTGCGGACCGGCTACTG 122225 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 | | ||| || | |||| | |||||| ||||||| || || || |||||| | Sbjct 122226 GTAGAGCTGGGCGTCGGGAAAATCTACAACACCAAGAATCCTTTCAATTTCATGGAGATG 122285 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAG 243720 || ||||| | ||||| || |||||||| |||||| Sbjct 122286 ATCTCGCTGGACGGGAAGACCAACTTCTTTGAAAAG 122321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102802281425000