Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_012530.1 Length=142111 Score E Sequences producing significant alignments: (Bits) Value seq1410 86.0 6e-12 >seq1410 Length=1599 Score = 86.0 bits (94), Expect = 6e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 39064 TAAAAATAGAATCCTCATAAATTGATCGGTCAAGGACATTATTATCTTGTTTCATGGCTT 39123 |||| | || ||| || ||||| || |||||||| ||||||||||||||||| | || | Sbjct 1493 TAAATAAAGCATCTTCGTAAATCGAACGGTCAAGTACATTATTATCTTGTTTTAGTGCCT 1434 Query 39124 CTTTAATCATCTTAAAGCGTCTGTTCAAGAAAAACACCTGCAATAAAAATGCATA 39178 |||||||||| || ||| | || |||||| | | ||| | |||||| |||| Sbjct 1433 TTTTAATCATCGAGAACCGTTTATTTAAGAAATAAATCTGAAGTAAAAAGCCATA 1379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454595944380000