Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_015253.1 Length=127065 Score E Sequences producing significant alignments: (Bits) Value seq1017 145 6e-30 >seq1017 Length=11781 Score = 145 bits (160), Expect = 6e-30 Identities = 284/418 (68%), Gaps = 4/418 (1%) Strand=Plus/Plus Query 82961 CAGAGAAATGGTGCAGGAGCGGTATACCTAAACGTATTCCACCCAGATATTATTAACTTT 83020 || ||||| ||||| || | || || || | || ||||| || || || ||| | || Sbjct 7404 CAAAGAAACGGTGCTGGGGTTGTTTATCTTAGTGTTTTCCATCCTGACATCATTCAATTC 7463 Query 83021 TTAGCAACAAAGAAAGAGAACGCAGATGAAAAAGTACGCATCAAGACATTGTCAATGGGC 83080 || | | || || || ||||| || |||||| | || | || || | ||| | || Sbjct 7464 TTGGGAGTTAAAAAGGAAAACGCCGACGAAAAAATCCGAGTAAACACCCTTTCACTTGGT 7523 Query 83081 TTAATATTGCCTGATAAGTTTTACGAGCTAGTAGGAAACGATGACTATATGTACTTATTC 83140 | | |||| ||||| ||||| ||||| | ||| ||||| |||||||| ||||| Sbjct 7524 GTGGTTGTGCCAGATAAATTTTATGAGCTCGCTAAAAATGATGATGATATGTACCTATTC 7583 Query 83141 AGCCCTTACGATGTTGAAAGAGAGTATGGTAAGCCCTTCTCTTACATTAACATCACGGAA 83200 || || || ||||||||| | |||||||| |||||||| || || | || | || Sbjct 7584 AGTCCATATGATGTTGAACGTGAGTATGGAGTTCCCTTCTCATATGTTGATATTTCTAAA 7643 Query 83201 GAATACGATAACCTAGTAGAAAATAAGAGTATTACTAAGTCACGTATTAAGGCACGTCAA 83260 |||||||| || | || | || |||| ||| ||||| | ||| || ||| || Sbjct 7644 GAATACGACAATATGGTCAAGAACAAGAACATTTCTAAGAAAAAGATTCGAGCTCGTGAA 7703 Query 83261 TT--AAACGACGAGATATCTAAGCTACAGCAAGAAGCAGGCTATCCATATATCATTAACG 83318 | |||| ||| || || ||||| |||||| | ||||||||||| || || ||| Sbjct 7704 CTTGAAAC--CGAAATCGGAAAACTACAACAAGAATCTGGCTATCCATACATTATCAACA 7761 Query 83319 AAGACACAGTCAACCTAGCTAACGCAGGTGACGGTAAGGTGATTATGAGCAACCTCTG 83376 ||||| || |||| | ||| | | |||||| ||| | | ||||| || || || Sbjct 7762 TTGACACCGTTAACCGTGATAATCCGGTTGACGGCAAGATTGTCATGAGTAATCTGTG 7819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406455952923000