Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq3593 118 1e-21 >seq3593 Length=14824 Score = 118 bits (130), Expect = 1e-21 Identities = 337/518 (65%), Gaps = 0/518 (0%) Strand=Plus/Minus Query 154587 AAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCA 154646 || ||| | |||| ||| | || | |||| || | || || |||||||| | || | Sbjct 1614 AAGTGGCTGTGTGCTATTAGCGGTTATGATGCTGTTTCCTTCCAACCTAATTCTGGCGCG 1555 Query 154647 CAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGAT 154706 ||||| || |||||||| || | | || | || || ||||| || || || | Sbjct 1554 CAGGGGGAATATGCAGGTTTGCTTGTTATTCGTGCGTATCATCAGGGGCGTGGGGAAGGG 1495 Query 154707 AAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTC 154766 | | | || ||||| || || | || || || || || || || ||| ||| Sbjct 1494 CATCGGACAGTTTGTTTAATTCCGGCTTCTGCGCACGGTACCAACCCAGCTTCTGCCCAA 1435 Query 154767 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAA 154826 ||||| || ||||| ||||| | || |||||||||| | || ||||| || | || Sbjct 1434 ATGGCGGGCATGAAGGTTGTGGTGGTAAAGTGTGATGCAGGCGGCAACATTGATCTGGAA 1375 Query 154827 GATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAC 154886 || | | ||||| || | || | ||| ||| | | |||||||| || Sbjct 1374 GACATGCATGAGAAAATAAAAGCGCATGCGAATGATCTGGCCGCAGTGATGATTACTTAT 1315 Query 154887 CCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGAC 154946 || || || ||||| || |||||| ||||| | | || ||| | | || || Sbjct 1314 CCTTCCACTCATGGCGTGTTTGAAGAAAACATGCGTGAAATCTGTGATCTGGTGCACTCA 1255 Query 154947 AATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAA 155006 ||||| ||||||||| | ||||| || || | ||||| ||||| || || ||| Sbjct 1254 GCCGGTGGGCAGGTATATGTGGATGGCGCCAACATGAATGCTCAGGTTGGGCTTGCACGC 1195 Query 155007 CCATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCA 155066 || || || |||| ||||| | || | ||| | |||||||| ||||| |||||| Sbjct 1194 CCGGCAGACTACGGTGGGGATGTTAGCCACTTTAACCTGCATAAAACTTTCTGCATTCCA 1135 Query 155067 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 ||||| || || || || || | || || || ||||| Sbjct 1134 CATGGTGGCGGTGGACCGGGTATGGGGCCAATTGGTGT 1097 Score = 104 bits (114), Expect = 3e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 153204 CTTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTT 153263 || || || ||||| || || || || | ||| | || || ||||| || |||| Sbjct 3019 CTGATCGGGCAAGGGTATTACGGTACGGTGCTGCCCGCTGTTATCCAGCGGAATATTCTG 2960 Query 153264 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323 || ||||| |||||||||| ||||||| || ||||| | || || || || | Sbjct 2959 GAAAATCCGGCTTGGTACACAGCTTACACGCCGTATCAGCCAGAAATCAGCCAAGGGCGT 2900 Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383 ||||||| | || || | |||||| | || ||||| || ||||| || || || Sbjct 2899 CTGGAAGCCCTGTTGAACTTCCAAACCATGATTACAGAGCTGACAGGGTTGGATATCGCC 2840 Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 ||| | ||||| ||||||||||||| ||||| |||||||| ||| Sbjct 2839 AACTCTTCTCTGCTAGATGAAGCAACAGCAGCGGCAGAAGCCATG 2795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579172979120000