Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq3593 140 4e-28 >seq3593 Length=14824 Score = 140 bits (154), Expect = 4e-28 Identities = 344/519 (66%), Gaps = 2/519 (0%) Strand=Plus/Minus Query 159262 AAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCA 159321 || ||| | |||| ||| | || | |||| || | || || |||||||| | || | Sbjct 1614 AAGTGGCTGTGTGCTATTAGCGGTTATGATGCTGTTTCCTTCCAACCTAATTCTGGCGCG 1555 Query 159322 CAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGAT 159381 ||||| || |||||||| || | | || | || || ||||| || || || | Sbjct 1554 CAGGGGGAATATGCAGGTTTGCTTGTTATTCGTGCGTATCATCAGGGGCGTGGGGAAGGG 1495 Query 159382 AAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTG 159441 | | | || ||||| || || | || || || || || || || || || || Sbjct 1494 CATCGGACAGTTTGTTTAATTCCGGCTTCTGCGCACGGTACCAACCCAGCTTCTGCCCAA 1435 Query 159442 ATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAA 159501 ||||| || ||||| ||||| | || |||||||||| | |||||||| || | || Sbjct 1434 ATGGCGGGCATGAAGGTTGTGGTGGTAAAGTGTGATGCAGGCGGCAACATTGATCTGGAA 1375 Query 159502 GATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATAT 159561 || | | ||||| || | || | ||| ||| | | |||||||| ||| Sbjct 1374 GACATGCATGAGAAAATAAAAGCGCATGCGAATGATCTGGCCGCAGTGATGATTACTTAT 1315 Query 159562 CCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCA-TGA 159620 || || || ||||| || |||||| |||||| | | || ||| | | || || | | Sbjct 1314 CCTTCCACTCATGGCGTGTTTGAAGAAAACATGCGTGAAATCTGTGATCTGGTGCACTCA 1255 Query 159621 GAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAA 159680 | ||||| ||||||||| | ||||| || || | ||||| ||||| || || ||| Sbjct 1254 GCC-GGTGGGCAGGTATATGTGGATGGCGCCAACATGAATGCTCAGGTTGGGCTTGCACG 1196 Query 159681 ACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCC 159740 || ||||| |||| ||||| | || | ||| | ||||| || ||||| ||||| Sbjct 1195 CCCGGCAGACTACGGTGGGGATGTTAGCCACTTTAACCTGCATAAAACTTTCTGCATTCC 1136 Query 159741 ACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||| || || || || || | || || |||||||| Sbjct 1135 ACATGGTGGCGGTGGACCGGGTATGGGGCCAATTGGTGT 1097 Score = 100 bits (110), Expect = 3e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 157879 CTTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTT 157938 || || || ||||| || || || || | ||| | || || ||||| || |||| Sbjct 3019 CTGATCGGGCAAGGGTATTACGGTACGGTGCTGCCCGCTGTTATCCAGCGGAATATTCTG 2960 Query 157939 GAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 157998 || ||||| |||||||||| ||||||| || ||||| | || || || || | Sbjct 2959 GAAAATCCGGCTTGGTACACAGCTTACACGCCGTATCAGCCAGAAATCAGCCAAGGGCGT 2900 Query 157999 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCA 158058 ||||||| | || || | |||||| | || ||||| || ||||| | || || Sbjct 2899 CTGGAAGCCCTGTTGAACTTCCAAACCATGATTACAGAGCTGACAGGGTTGGATATCGCC 2840 Query 158059 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTTAGC 158111 ||| | ||||| ||||||||||||| ||||| |||||||| ||| ||| || Sbjct 2839 AACTCTTCTCTGCTAGATGAAGCAACAGCAGCGGCAGAAGCCATGGCGTTGGC 2787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588010771480000