Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq1066 89.7 6e-13 seq1335 87.8 2e-12 >seq1066 Length=6976 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 22401 TGCCCTTATAGCTCAGTGGTAGAGCAACGCTTTTGTAAAGCGTAGGTCGTTGGTTCAAAT 22460 |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||| Sbjct 6902 TGCCCTTATAGCTCAGTGGTAGAGCAACCGCCTTGTAAGCGGTAGGTCGTGGGTTCAAAT 6843 Query 22461 CCGACTGGGGGC 22472 || ||||||||| Sbjct 6842 CCTACTGGGGGC 6831 >seq1335 Length=17619 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 17789 GGGCGAATAGCTCAGCGGTAGAGCTACTCGTTTACACCGAGTCGGTCGGGGGTTCGATCC 17848 |||| | ||||||||||||||||| ||||||||||||||| |||||| |||||||||| Sbjct 7201 GGGCAATTAGCTCAGCGGTAGAGCGTCTCGTTTACACCGAGATGGTCGGCGGTTCGATCC 7260 Query 17849 CCTCTTCGCCCAC 17861 | || | |||||| Sbjct 7261 CGTCATTGCCCAC 7273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560569458200000