Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04]
5,500 sequences; 167,263,958 total letters
Query= NC_018452.1
Length=61847
Score E
Sequences producing significant alignments: (Bits) Value
seq1506 116 1e-21
>seq1506
Length=1294
Score = 116 bits (128), Expect = 1e-21
Identities = 243/362 (67%), Gaps = 0/362 (0%)
Strand=Plus/Plus
Query 22167 AAGAAATACTTCAAAGGGCCGAAGGCTGGTCAGCTCTCCTGCAATCCGCTGGGAAAAAAC 22226
|| ||||||| ||||| || || ||||| ||||| || | || || || || |||||
Sbjct 12 AAAAAATACTATAAAGGACCTAAAGCTGGGCAGCTTTCTGGAAACCCTCTAGGCAAAAAT 71
Query 22227 CCAGGCGACGTGTGGATTTTCCCCAACGTCAAGAACAACCACGTCGAAAAGACCGACCAT 22286
|| || || | ||||| || || || || || || || || || ||||| || |||
Sbjct 72 CCGGGTGATATTTGGATATTTCCAAATGTAAAAAATAATCATGTTGAAAAAACAATTCAT 131
Query 22287 CCATGCCAGTTCCCGGTCGAGCTGGTCGAGCGGTTGGTGCTGTCGCTGACCGAGCCCGGT 22346
|| ||||| || ||||| || | ||||| | | || || || | || || ||
Sbjct 132 CCTTGCCAATTTCCGGTTGAATTAGTCGAAAGACTTGTTCTTTCATTAACGGATGAAGGG 191
Query 22347 GACGCGGTGCTCGACCCGTACATGGGCGTGGGCTCGTCGGTCGTCGCTGCCCTCAAGCAC 22406
|| || | || ||||| ||||| || || || || | || || || | ||| |
Sbjct 192 GATAATGTTTTTGATCCGTATATGGGAGTCGGATCTTCAATAGTGGCAGCTATAAAGAAT 251
Query 22407 GACCGCCTCGGGTACGGCTGCGACGTCGTGAAGGAGTACGTCGATGCCGCCTGGGAGCGC 22466
| || | || || || ||||| || || || ||||| |||||| || |||||| |
Sbjct 252 AATCGTATTGGATATGGGTGCGATGTTGTTAAAGAGTATGTCGATATAGCTTGGGAGAGG 311
Query 22467 GTGCACCGGCTTCGCGCCGGCACACTCCAGACGCGCCCCATGCACAAGCCCGTCTATGAC 22526
|| || |||| || ||||| || | || || || ||| | ||||| |||||||||
Sbjct 312 GTTCATGACTTTCGAGCAGGCACTCTTGAAACTCGTCCTATGAATAAGCCAGTCTATGAC 371
Query 22527 CC 22528
||
Sbjct 372 CC 373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 197775881919000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |