Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq5018 111 2e-19 >seq5018 Length=457986 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 197077 TTGTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACC 197136 || || | || ||| || || ||||| || | |||||||| || |||||||| || Sbjct 267165 TTTTCAGTATCGTAGCAAGCCAGTAAAAAGCCACCGTAGGTACCAGTTCTCTTGCCTTTG 267106 Query 197137 CCGTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCT 197196 || ||| |||| || || || || |||||||| | ||||| ||| |||||||| Sbjct 267105 CCTTTGTAGCCGCCAATCACAACGAGATCCAGCGAGTCGCCCACATTGGATATGTAATCC 267046 Query 197197 TTCTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCC 197256 |||||||| || |||||| | ||||||||||| ||||| || || ||||| | ||| Sbjct 267045 TTCTTCAGCTTTAGCCAGTTCCTAGATCTCTTTGCAATTTCATAAGTTGCTTCCTGATCC 266986 Query 197257 AGGGTCTTGATCATCAATCCCTCGCA 197282 || || || | ||| | ||||| || Sbjct 266985 AGTGTTTTAACCATAAGACCCTCACA 266960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676683074840000