Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq1081 109 1e-18 >seq1081 Length=8782 Score = 109 bits (120), Expect = 1e-18 Identities = 205/301 (68%), Gaps = 3/301 (1%) Strand=Plus/Minus Query 150510 ATATGGGTGCATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACA 150569 ||||||| |||| ||||||||||||||||||||| |||| ||||| ||| | | | Sbjct 3345 ATATGGGATCATTAGTTGCTGGTACTAAGTATCGTGGCCAATTTGAAGACCGTCTGAAGA 3286 Query 150570 ATTTGCTACAAGAACTAAAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCCATA 150629 | | ||| |||| | |||| | | |||| ||||| || || |||||| | |||| Sbjct 3285 AAGTTCTAAAAGAGGTTGAAGATAGTGGAAATGTAATTCTATTTATTGATGAATTGCATA 3226 Query 150630 CTATTATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAAC 150689 || | || |||||||||| ||| | || || | ||| || || || |||| Sbjct 3225 CTCTAATTGGTGCTGGTGGTACT---GAGGGATCAGTTGATGCCTCAAACATTTTGAAAC 3169 Query 150690 CTGCTCTATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGTA 150749 | | || |||| ||| || ||| || || ||||| || || |||||||||| | Sbjct 3168 CATCCCTTGCTCGAGGTCAAGTTCAAGTAATGGGTGCTACCACACTTGATGAATATCAAA 3109 Query 150750 AACACATTGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAAC 150809 | |||||||| |||| ||| | | ||||| || | |||||| |||| |||| Sbjct 3108 AGTACATTGAATCCGATGAAGCTTTGGAACGTCGATTTGCAACGGTTGAAATTGAAGAAC 3049 Query 150810 C 150810 | Sbjct 3048 C 3048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147509530739000