Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_020197.1 Length=45606 Score E Sequences producing significant alignments: (Bits) Value seq995 96.9 1e-15 >seq995 Length=30878 Score = 96.9 bits (106), Expect = 1e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 8357 GTTAACCGTCATTTCAAAAATGATAACGGAGAGCGTGAAACTGACTTTATCAATTGCGTT 8416 ||| |||||| ||||| ||| || || || || ||| ||||||| |||| || ||| Sbjct 6929 GTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGACTTCGTCAACTGTGTT 6988 Query 8417 ATCTGGAGACAGCAAGCTGAAAACTTGGCTAACTGGGCTAAAAAAGGTGCATTGATTGGC 8476 || ||| || | |||||||||||| || |||| | | || ||| || | |||| Sbjct 6989 ATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGGGTTCACTTGTTGGA 7048 Query 8477 ATTACTGGACGTATTCAGACTCGTAGCTATGAAAATCAGCAAGGTCAACGTGTTTACGTG 8536 || || || |||||||| || | || || || |||| || ||||| ||||| || Sbjct 7049 ATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGCCAACGAGTTTATGTT 7108 Query 8537 ACTGAAGTTGTCGCTGAAAACTT 8559 || ||||| || | ||| ||||| Sbjct 7109 ACCGAAGTAGTTGTTGAGAACTT 7131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145808076288000