Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_021532.1 Length=103910 Score E Sequences producing significant alignments: (Bits) Value seq1298 82.4 5e-11 >seq1298 Length=12720 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 86821 CGTACTGCGGTATGCTGTCTGTCTTCAGTGAATCTAGGCAAATACGATGAGTGGAAAGAC 86880 ||||| || ||||||||||| ||||| ||||||| | | || ||||||||||| || Sbjct 2098 CGTACGGCTGTATGCTGTCTTTCTTCCCTGAATCTGGAAACATGGGATGAGTGGAAGGAT 2157 Query 86881 GACAAGTTGTTTATTGGCGACCTTATTGAGATGCTAGATAACGTACTAGAGTATTTCATA 86940 || | |||||||| ||| | || | | || ||||| || || || | || || Sbjct 2158 AACCCGCAGTTTATTGAGGACGTGATGCTGTTCCTTGATAATGTGCTGCAGGACTTTATC 2217 Query 86941 GAAAATGCCCCGGCCCCTCTGGCCAGAGCAAAATACTCTGCCATGCGCGAGCGTTCTCTT 87000 || ||| || | | || | | || ||||| | |||||||| || || ||| || Sbjct 2218 GACCGTGCGCCAGAAGATATGCACCGCGCTAAATATGCGGCCATGCGTGAACGCTCTGTT 2277 Query 87001 GGCCTAGGTGCCATGGGTTTCCA 87023 || || |||| ||||| ||||| Sbjct 2278 GGGCTTGGTGTTATGGGATTCCA 2300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 332364919670500