Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq832 147 1e-30 >seq832 Length=33730 Score = 147 bits (162), Expect = 1e-30 Identities = 435/663 (66%), Gaps = 11/663 (2%) Strand=Plus/Minus Query 67598 GCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCT 67657 || || || || || |||| || | ||||| || ||||| || ||||| || || Sbjct 19765 GCGCTGGGTATTGGTGGGTTGCCCCGTGGCCGTGTGGTGGAAATTTACGGGCCAGAAAGC 19706 Query 67658 TCAGGGAAGTCAACGTTGTGC-CTCCACGCGGTGGCCAATGCCCAGAAGGCCGGTGGCAA 67716 || || || | ||| | ||| || || || | || | || || ||| ||||||| Sbjct 19705 TCTGGTAAAACCACGCT-TGCGCTGCATGCTATTGCAGAAGCACAAAAGCGTGGTGGCAC 19647 Query 67717 CGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGT 67776 || | || || ||||| ||| | | ||||| | || ||| ||| || || Sbjct 19646 TTGTGCTTTTATTGATGCCGAGCATGCGTTGGACCCCGGTTATGCCAAAAAGCTGGGCGT 19587 Query 67777 GGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGT 67836 |||||| || || || || | |||||||| | || || ||||| |||| || | Sbjct 19586 GGATGTAGATAACCTGCTGATCAGCCAGCCAGATGCGGGTGAACAGGCGTTGGAAATTGC 19527 Query 67837 TGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCT 67896 || ||||| || |||| || | | | || || || ||| || || || Sbjct 19526 AGATACACTCGTGCGATCCGGCGCTATTGACGTTTTGGTGGTAGATAGTGTTGCAGCACT 19467 Query 67897 GGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCG 67956 ||||||||| || || || ||||| ||||| || || || || ||||| ||||| || Sbjct 19466 GGTGCCGCGCGCAGAACTGGAAGGAGACATGGGCGATAGCCATGTTGGCCTTCATGCGCG 19407 Query 67957 CCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCAC 68016 ||||| ||||| |||| ||||| || || ||| | || || |||| || || | Sbjct 19406 TTTGATGAGCCAGGCTTTGCGTAAGCTTACGGGTACGGTGGCACGCTCCAATACTCTGAT 19347 Query 68017 CCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA--ACGTGGGCTACGGCCCGAATGAG 68074 | | |||| ||| | ||| ||| || || | || | || ||| || Sbjct 19346 GATTTTCCTGAACCAGATCCGCCTGAAAATTGGTGTGATGTTTGGTAAT--CCG---GAA 19292 Query 68075 ACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGG 68134 || ||||| |||||||| || ||| ||||| | || |||||||||||| | ||| | Sbjct 19291 ACAACCACGGGTGGTAATGCCCTGAAGTTCTATTCTTCCGTGCGTATGGATATTCGCCGC 19232 Query 68135 ATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC-GGCAACCGCACGCGCGTGAAGGTTGT 68193 |||| || ||||| ||||||| || | || || | |||||||| |||||||| Sbjct 19231 ATCGGGTCCATCAAGGACAAGGATGAGG-TGACAGGTAATCAGACGCGCGTAAAGGTTGT 19173 Query 68194 CAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGG 68253 || |||||| ||||||| || ||| |||| || ||| ||| | |||||||| || Sbjct 19172 TAAAAACAAGATGGCGCCACCTTTCCGTCAGGTAGAATTTGATATCATGTACGGCGAAGG 19113 Query 68254 CAT 68256 ||| Sbjct 19112 CAT 19110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247433013144000