Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5008 104 3e-16 >seq5008 Length=644625 Score = 104 bits (114), Expect = 3e-16 Identities = 118/156 (76%), Gaps = 3/156 (2%) Strand=Plus/Plus Query 1817478 GAGGGCGTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAG 1817537 ||||| |||| || | || |||| |||||||||||||||||||| | | ||| | Sbjct 619254 GAGGGTGTCCTGCACAATACCCATGACGGGCTTGTTGGCCTGCGGCGTGATGATCTGCCG 619313 Query 1817538 GGCCACGTTCATGGTGTGCGTCACCTCGGCGCGCGCGTCTCA--GACTGGGGCACATGGA 1817595 || | | | | ||| | |||||||||||||| || || ||||| ||||| || | Sbjct 619314 GGGCGTGATGTGGATGTTCTCCACCTCGGCGCGCGTCTC-CATGGACTGCGGCACGTGCA 619372 Query 1817596 GGTTCATCTCGTCGCCGTCAAAGTCGGCATTGTAGG 1817631 ||||||||||||||||||| || ||||| ||||||| Sbjct 619373 GGTTCATCTCGTCGCCGTCGAAATCGGCGTTGTAGG 619408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177280714891000