Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_028911.1 Length=34176 Score E Sequences producing significant alignments: (Bits) Value seq995 158 3e-34 >seq995 Length=30878 Score = 158 bits (174), Expect = 3e-34 Identities = 225/317 (71%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 21660 CGTGATTCAAGCAAAGCAAAATTCTCAACAATGACCTCAGTCACGAATACTTTCTGGCCT 21719 |||| |||||| | | ||| |||||||||| || || || || | ||| ||||| Sbjct 7149 CGTGGTTCAAGGAGGGTAAAGTTCTCAACAACTACTTCGGTAACATAAACTCGTTGGCCC 7090 Query 21720 TGCGCGTTATCATACGTACGTGTTTGGATATGACCTTCGATGCCAACAAGTGAACCCTTG 21779 ||| ||| || || | || || || || |||||||||| ||||||||||||||||| Sbjct 7089 TGCTTGTTCTCGTAATTTCGGGTCTGAATCCGACCTTCGATTCCAACAAGTGAACCCTTA 7030 Query 21780 TGCGTGAAGTTGGCAAAATTCTCGGCAGACTTACGCCAGATGGCACAATTGATGAAGTCA 21839 ||| |||||||||||| || || || || || ||||| || |||| |||| ||||||| Sbjct 7029 TGCACGAAGTTGGCAAAGTTTTCAGCTGATTTTCGCCAAATAACACAGTTGACGAAGTCA 6970 Query 21840 GTTTCTCGTTCCCCATTTGCGCTACGAAATTGGCGATCAACAGCAATCGTAAACGAACCA 21899 | ||| || || ||||| | | || | || |||||||| | ||||| | |||| Sbjct 6969 GCTTCCCGATCACCATTCGAATTGGTGAAACGACGGTCAACAGCTAGGGTAAAAGTACCA 6910 Query 21900 ACCGCTGTTCCGCTTTGCGTATAGCGAAGGCCAACGTCTTTAGTTAATCTGCCTGTTAAA 21959 || || | || |||| || || || | |||||||| ||||| | || || | | Sbjct 6909 ACTGCCGCGCCATTTTGGGTGTATCGCAAATCAACGTCTCGTGTTAAGCGTCCAGTAAGA 6850 Query 21960 GCAACTGAATTAAGCAT 21976 | |||| ||||| ||| Sbjct 6849 ACTACTGTATTAATCAT 6833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109234465158000