Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_029030.1 Length=31075 Score E Sequences producing significant alignments: (Bits) Value seq995 109 1e-19 >seq995 Length=30878 Score = 109 bits (120), Expect = 1e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 28704 TTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTC 28763 ||||| || || ||| ||||| ||| | ||| |||||||| || |||||||| ||| Sbjct 6917 TTTACCCTAGCTGTTGACCGTCGTTTCACCAATTCGAATGGTGATCGGGAAGCTGACTTC 6976 Query 28764 ATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGG 28823 | || || |||||||| | ||||||||| || || |||| | | || || Sbjct 6977 GTCAACTGTGTTATTTGGCGAAAATCAGCTGAAAACTTTGCCAACTTCGTGCATAAGGGT 7036 Query 28824 ACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAGCAAGGACAG 28883 | ||| | || || ||||| ||||||||||| ||||| || ||| |||| || || Sbjct 7037 TCACTTGTTGGAATCGAAGGTCGGATTCAGACCCGAAATTACGAGAACAAGCAGGGCCAA 7096 Query 28884 CGTGTTTATGTTACAGAAGTTGTTG 28908 || ||||||||||| ||||| |||| Sbjct 7097 CGAGTTTATGTTACCGAAGTAGTTG 7121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 99311913267000