Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_029058.1 Length=106071 Score E Sequences producing significant alignments: (Bits) Value seq1345 98.7 7e-16 >seq1345 Length=12888 Score = 98.7 bits (108), Expect = 7e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 34838 TGAATCCAGCGGCTCCTACACTGCCCAGAACGGTCAATACGTTGGTCGCTACCAACTTTC 34897 |||||| | ||||| |||||||| || ||| | ||| ||| |||||| | || Sbjct 8204 TGAATCAGGTGGCTCATACACTGCTTCAAATGGTAACTACTACGGTAAGTACCAATTATC 8145 Query 34898 CAGCTCTTACCTAAATGGTGACTATTCGCCAGCAAACCAAGAACAAGTAGCTGACCAGTA 34957 | || ||| |||||||||||||||| | ||| |||||||| ||| ||| |||| || Sbjct 8144 TAAGTCATACTTAAATGGTGACTATTCACAAGCTAACCAAGATAGAGTTGCTAACCAATA 8085 Query 34958 TGTCGCTTCACGCTATGGTTCGTGGAGTG 34986 || ||||||| |||||||| ||||||| Sbjct 8084 CGTAACTTCACGTTATGGTTCATGGAGTG 8056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339279656136000