Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq5008 104 2e-17 >seq5008 Length=644625 Score = 104 bits (114), Expect = 2e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || ||||| || | || || ||||| || || |||| |||| ||||| | ||||||| Sbjct 342876 GATCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACCCTGTCCGAC 342935 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCG 28018 ||||||||||| || ||| ||||||||||||||| |||||| |||| ||||||| Sbjct 342936 TACAACATCCAGAAGGAGTCCACTTTGCATTTGGTGTTGCGTCTGCGCGGCGGCG 342990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355838546098500