Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20bipectinata_20[refseq_20GCF_5F000236285.1_202013-03-04] 5,500 sequences; 167,263,958 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq5403 84.2 2e-11 >seq5403 Length=2915140 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/260 (68%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGC 23831 |||| | || || || || || |||| ||| ||||| || || || | ||||| || || Sbjct 121787 ATCTCTAATGTAAGTGTCGATGAGTACACTGTACATCTCCGAGTGTACGTTTTCCATGGC 121728 Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 || || || ||||||||||| | ||| || | | ||||| || | | || | | Sbjct 121727 GATTTGGAAGCCATAAAAACAGCGAGCCTCCGTGACCTGAACCTCCTGACTGAAGCGCTC 121668 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | | | ||| ||||| ||||| ||||| |||||||||||| || || || | || Sbjct 121667 AACCAGATTCTCGTTTACAATTCCATCGGAAGCAGCAAAGAAGGCCAGCACGTGGGAGAT 121608 Query 23952 AAAATGTCTTTCATCAGTTGATAA-TTTTTTCCAATCATTAATATCTTTTGATAAATCAA 24010 || || | |||||| || ||| | |||||| ||| ||| || || | || | Sbjct 121607 GAAGTGGCGTTCATC-GTCCTTAAGGCGGTGCCAATCGGTAAGATCCTTGGAAAGGTCCA 121549 Query 24011 CTTCATCAACTGTCCAAAAA 24030 | || || |||||||| ||| Sbjct 121548 CCTCCTCGACTGTCCAGAAA 121529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521452147700000