Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=22510139 Score = 107 bits (118), Expect = 2e-18 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533 |||||||||||| || | ||| ||||| || ||||| | ||||| || || ||||| || Sbjct 3318741 ATACGTATCAATGAGCACACTATACATCTCCGAGTGGACATTCTCCATCGCAATCTGGAA 3318682 Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593 |||||| ||||| || ||||| | ||| || ||||| ||| || || ||||||| Sbjct 3318681 TCCATAAAAGCAGCGTGCCTCTGTTATCTGCACTTCTTGACTAAAGCGCTCAACCAGGTT 3318622 Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAA 16632 |||||| || || || ||| || || ||||| ||||| Sbjct 3318621 CTCATTGACAATGCCATCAGAGGCTGCGAAAAATGCCAA 3318583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414361643920