Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq1 100 2e-16
>seq1
Length=33300182
Score = 100 bits (110), Expect = 2e-16
Identities = 276/418 (66%), Gaps = 10/418 (2%)
Strand=Plus/Plus
Query 18798 GGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAATCA 18857
|| ||| | || || ||||||||| | || ||||| ||||| ||| |||| ||| |
Sbjct 20734683 GGTCCCGTGTATGGTTTCCAGTGGCGTCACTTTGGTGCGGAGTATCGCACCTGT-AATGA 20734741
Query 18858 AACTATTTACAGC----AAGGAATCGATCAGCTGCAAACTGTTATAGATACAATTAAAAC 18913
| |||||| |||| || |||||||| || ||||| |||| | |
Sbjct 20734742 ---TGAATACAGCGGCCAAGGCATTGATCAGCTCCAGGAGGTTATTAATACCTTGCGCAA 20734798
Query 18914 AAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTTAAT 18973
|| ||| || || || || || || | |||||||| | ||||| ||| |||
Sbjct 20734799 GAATCCAACTGATCGTCGCATCATAATGTCCGCCTGGAATCCCATTGATATACCCAAAAT 20734858
Query 18974 GGTACTACCTCCATGTCACA-CGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCCT 19032
|| ||| || || || ||| | | || ||||| || || || || |||||| | ||||
Sbjct 20734859 GGCACTGCCGCCTTGCCACTGCCTGGTG-CAGTTCTATGTGGCCAATGGTGAACTCTCCT 20734917
Query 19033 GCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGAT 19092
| || | || || | | || ||||| || || || || ||||||||||| |
Sbjct 20734918 GTCAGCTTTATCAACGCAGCGCCGACATGGGACTGGGAGTTCCCTTCAACATTGCATCCT 20734977
Query 19093 ATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATTC 19152
|||| |||||||||| || |||| ||||| || || | || || || || || || |
Sbjct 20734978 ATGCGTTTCTTACCTATATGATAGCCCATGTAACGGGCTTGAAGACAGGCGACTTTATCC 20735037
Query 19153 ATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCAGCT 19210
|||| | || ||||| ||| | || ||||||| | || | || | || |||||
Sbjct 20735038 ATACGCTTGGCGATGCTCATGTCTATAAGAATCATGTGGAGCCATTGAGAGAACAGCT 20735095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399503970786270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |