Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 >seq1 Length=33300182 Score = 118 bits (130), Expect = 1e-21 Identities = 178/253 (70%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 |||||||| || || ||||| || || || || || ||||| ||||| || | | Sbjct 20735080 GGCTCCACATGATTCTTATAGACATGAGCATCGCCAAGCGTATGGATAAAGTCGCCTGTC 20735021 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 | | |||||| | ||||| | ||| ||||| || | | ||| || ||||||||| Sbjct 20735020 TTCAAGCCCGTTACATGGGCTATCATATAGGTAAGAAACGCATAGGATGCAATGTTGAAG 20734961 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 || || ||||| |||||||| | ||| || || ||||| |||||||| || || Sbjct 20734960 GGAACTCCCAGTCCCATGTCGGCGCTGCGTTGATAAAGCTGACAGGAGAGTTCACCATTG 20734901 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 ||||| |||||||| |||| |||||| |||||||| ||||| ||| | || Sbjct 20734900 GCCACATAGAACTGCACCAGGCAGTGGCAAGGCGGCAGTGCCATTTTGGGTATATCAATG 20734841 Query 145927 GGGTTCCAGGCGG 145939 || |||||||||| Sbjct 20734840 GGATTCCAGGCGG 20734828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076755744240