Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2 123 5e-23 >seq2 Length=22510139 Score = 123 bits (136), Expect = 5e-23 Identities = 200/288 (69%), Gaps = 0/288 (0%) Strand=Plus/Plus Query 189448 TCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACG 189507 |||||||||| || | || ||||| | ||| || || ||||||||| | |||||||| Sbjct 17628667 TCTATGGAACTCGGCGCAGCTGCAGCTTGTGCAGGAGGGCAAAATGCATGGCTTTTTACG 17628726 Query 189508 AATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTA 189567 ||||||||||| ||||| || ||||| |||||| || ||||| |||||| || Sbjct 17628727 CATGTATTGGGCCAAGAAAATTCTTGAGTGGACTGAGACTCCTGAGCTGGCTTTGGAGTA 17628786 Query 189568 TAGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGG 189627 | ||| | | || | || || || || || |||||||| || || || || Sbjct 17628787 TGCTATATTGCTTAATGATAAATATAGTCTCGATGGTCGTGATCCTAATGGTTATGTGGG 17628846 Query 189628 TTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGG 189687 || |||||||| || |||| |||| ||| || |||||||| | | || ||||| Sbjct 17628847 CTGCATGTGGTCCATCGGCGGCATACATGATCAAGGTTGGAAAGAGCGTGCCATCTTTGG 17628906 Query 189688 AAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 189735 ||||| | |||||||| ||| | | | ||| || |||||||| Sbjct 17628907 TAAGATTCGCTATATGAACTATCAAGGCTGCAAGCGCAAGTTTGATGT 17628954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923196730760240