Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 120 2e-22 >seq1 Length=33300182 Score = 120 bits (132), Expect = 2e-22 Identities = 292/440 (66%), Gaps = 2/440 (0%) Strand=Plus/Plus Query 20207 ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTG 20266 ||||| | || || ||||||||||| |||||||| || || ||| | || ||||| || | Sbjct 20734663 ACCGTGAGGAAGGTGATTTGGGTCCCGTGTATGGTTTCCAGTGGCGTCACTTTGGTGCGG 20734722 Query 20267 AATATGTTGACATGAACACAA-ATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTT 20325 | ||| || || | | | || || ||||| | ||||| | || | ||| Sbjct 20734723 AGTATCGC-ACCTGTAATGATGAATACAGCGGCCAAGGCATTGATCAGCTCCAGGAGGTT 20734781 Query 20326 ATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCT 20385 |||||| | | ||| |||| || | | || || | | ||||||||| | Sbjct 20734782 ATTAATACCTTGCGCAAGAATCCAACTGATCGTCGCATCATAATGTCCGCCTGGAATCCC 20734841 Query 20386 AAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCT 20445 | ||| | || |||||| |||| || || || || || || || || || Sbjct 20734842 ATTGATATACCCAAAATGGCACTGCCGCCTTGCCACTGCCTGGTGCAGTTCTATGTGGCC 20734901 Query 20446 AATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCT 20505 ||| |||| | || ||||| | |||||||| ||| || ||||||||||| ||||| Sbjct 20734902 AATGGTGAACTCTCCTGTCAGCTTTATCAACGCAGCGCCGACATGGGACTGGGAGTTCCC 20734961 Query 20506 TTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 ||||| |||||| |||||| | ||||| |||||||| || ||||| || | || || Sbjct 20734962 TTCAACATTGCATCCTATGCGTTTCTTACCTATATGATAGCCCATGTAACGGGCTTGAAG 20735021 Query 20566 ACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCT 20625 || || ||||| |||| || | || || || ||| | || |||||| | || || Sbjct 20735022 ACAGGCGACTTTATCCATACGCTTGGCGATGCTCATGTCTATAAGAATCATGTGGAGCCA 20735081 Query 20626 TTAAAATTACAGTTAACACG 20645 || | | |||| | | ||| Sbjct 20735082 TTGAGAGAACAGCTCAAACG 20735101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183970809670