Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=26871514 Score = 89.7 bits (98), Expect = 4e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGG 33623 ||||||||| |||| ||||||||||| || ||| |||||| |||||||| ||||| || Sbjct 3598119 CGCATACCACAGATTGGCGACAAGTTCGCCTCGCGTCACGG-ACAGAAGGGTACGTGTGG 3598061 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 ||| ||| |||| ||||||| | ||||| ||| ||| ||| ||||| | | Sbjct 3598060 CATACAGTATCGCCAGGAGGACATGGCATTCACCTGCGAGGGCCTGGCGCCGGATATTAT 3598001 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGAC 33716 ||||| || ||||| | || || || ||||| Sbjct 3598000 TATCAATCCCCATGCCATTCCATCTCGTATGAC 3597968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233573950418