Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 3e-22
>seq1
Length=33300182
Score = 120 bits (132), Expect = 3e-22
Identities = 183/259 (71%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTGA 5299
||||| || ||||| || | |||||||| || ||||| |||| || |||| |
Sbjct 8647820 CCGGTGGAGCCGAAGCCCGCTTCGCCGCGTTCAGTGTCCTCCAGCTTGTCGACCTGCTCC 8647879
Query 5300 ACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACC 5359
| | |||| | | ||||| || || || | |||||| || | || || ||| |||
Sbjct 8647880 AATTCTGGATAGAAGATGCGCTCACAAATAAACTGAGCAATGCGATCACCACGCTTCACC 8647939
Query 5360 TCAAAGTCGCTGTTTCCGAAG--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTT 5417
|||||||| || ||||| || |||| || || || | |||||| ||||||||||
Sbjct 8647940 TCAAAGTCC--GTCTCCGAGTGATTGAACAATACAACGCCCAGATTGCCGCGGTAGTCTT 8647997
Query 5418 CGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTG 5477
| || | |||||| ||||| || || ||||| | || ||||| | || |||||||| |
Sbjct 8647998 CATCAACAACGCCGGCGCCGACATCAATAAAATTCTTTACCGCCAATCCAGAACGTGGAG 8648057
Query 5478 CTATGCGTCCGTAGCAACC 5496
| | |||||| ||| ||||
Sbjct 8648058 CAACGCGTCCATAGGAACC 8648076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447750366418720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |