Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq2 185 8e-42 seq1 82.4 7e-11 >seq2 Length=22510139 Score = 185 bits (204), Expect = 8e-42 Identities = 219/297 (74%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 71677 TGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCACGGATA 71736 ||| || |||||||| | || |||| ||||| | ||||| ||||| || || | Sbjct 17628661 TGACGATCTATGGAACTCGGCGCAGCTGCAGCTTGTGCAGGAGGGCAAAATGCATGGCTT 17628720 Query 71737 CCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAGGCGCT 71796 |||||||||| |||||||| || ||||| ||||||||| | ||||| |||| ||| | Sbjct 17628721 TTTACGCATGTATTGGGCCAAGAAAATTCTTGAGTGGACTGAGACTCCTGAGCTGGCTTT 17628780 Query 71797 CGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTAACGGTTA 71856 |||||| |||| | || || |||| ||| |||||||| ||||| |||||||| ||||| Sbjct 17628781 GGAGTATGCTATATTGCTTAATGATAAATATAGTCTCGATGGTCGTGATCCTAATGGTTA 17628840 Query 71857 TGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGAACGTCAAGT 71916 ||| || ||||||||| ||| |||| | || ||| | | | ||| ||| | Sbjct 17628841 TGTGGGCTGCATGTGGTCCATCGGCGGCATACATGATCAAGGTTGGAAAGAGCGTGCCAT 17628900 Query 71917 GTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAATGTGAA 71973 |||||||| |||||||||||||| | | || ||| | |||||||| ||||||| Sbjct 17628901 CTTTGGTAAGATTCGCTATATGAACTATCAAGGCTGCAAGCGCAAGTTTGATGTGAA 17628957 >seq1 Length=33300182 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 26766 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCA 26825 || ||||| | || || ||||| | || || || | ||||| | || | ||| || Sbjct 5269239 AAGATGCAGATCTTCGTTAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTCGAACCA 5269298 Query 26826 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGAT 26885 || || ||||| | |||||| |||||| ||||||||||| || ||||| ||| Sbjct 5269299 TCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 5269358 Query 26886 CAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTAT 26945 |||||| | | || | || ||||| ||| | ||||||| | | | | ||||||| Sbjct 5269359 CAACAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGTCGTACTCTGTCCGACTAT 5269418 Query 26946 AACATTCAAAAAGAATCTAC 26965 || |||||||| || || || Sbjct 5269419 AATATTCAAAAGGAGTCCAC 5269438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662364100320