Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 1e-26
seq1 134 1e-26
seq5 118 1e-21
>seq3
Length=28180402
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| ||||||||||| ||| |
Sbjct 22368793 CCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 22368852
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | |||||||||||| || |||
Sbjct 22368853 AGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 22368912
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 22368913 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 22368972
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| ||||||||
Sbjct 22368973 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369019
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| ||||||||||| ||| |
Sbjct 22369021 CCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 22369080
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | |||||||||||| || |||
Sbjct 22369081 AGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 22369140
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 22369141 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 22369200
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| ||||||||
Sbjct 22369201 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369247
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| ||||||||||| ||| |
Sbjct 22369249 CCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 22369308
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | |||||||||||| || |||
Sbjct 22369309 AGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 22369368
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 22369369 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 22369428
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| ||||||||
Sbjct 22369429 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369475
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| ||||||||||| ||| |
Sbjct 22369477 CCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 22369536
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | |||||||||||| || |||
Sbjct 22369537 AGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 22369596
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 22369597 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 22369656
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| ||||||||
Sbjct 22369657 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369703
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| ||||||||||| ||| |
Sbjct 22369705 CCACCACGCAGACGGAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 22369764
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | |||||||||||| || |||
Sbjct 22369765 AGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 22369824
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 22369825 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 22369884
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| ||||||||
Sbjct 22369885 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22369931
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || || || | ||| |||||||| ||||||||||| ||| |
Sbjct 22368565 CCACCACGCAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 22368624
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | |||||||||||| || |||
Sbjct 22368625 AGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 22368684
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 22368685 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 22368744
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||| ||||||||
Sbjct 22368745 TCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 22368791
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||| |||||||| ||||||||||| ||| |
Sbjct 22369933 CCACCACGCAGACGGAGCACCAAGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAC 22369992
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||||||||| ||| |||| | |||||||||||| || |||
Sbjct 22369993 AGAGTGCGTCCATCCTCCAACTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGG 22370052
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | ||| | || ||| ||| ||| |
Sbjct 22370053 ATGCCCTCCTTGTCTTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTGGGCTCAACC 22370112
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | ||| || || || | || || || || |||||||||
Sbjct 22370113 TCCAAGGTGATGGTCTTGCCAGTCAATGTCTTCACAAAGATCTGCATG 22370160
>seq1
Length=33300182
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||||||||||| || |||||||| ||| |
Sbjct 90658 CCACCACGCAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 90717
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || ||||||||||| ||| |||| ||||||||||| || || ||
Sbjct 90718 AGAGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 90777
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| |||||||| ||| || ||||| | ||| | || || | || |||||
Sbjct 90778 ATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACC 90837
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| || ||||| || || || |||||
Sbjct 90838 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCAT 90884
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| ||||| || || | ||||||||||| || |||||||| ||| |
Sbjct 2542954 CCACCACGCAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAC 2542895
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || ||||||||||| ||| |||| ||||||||||| || || ||
Sbjct 2542894 AGAGTACGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGGGGA 2542835
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| |||||||| ||| || ||||| | ||| | || || | || |||||
Sbjct 2542834 ATTCCCTCTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCAGAGGGCTCGACC 2542775
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || ||||| || ||||| || || || |||||
Sbjct 2542774 TCCAAGGTGATGGTCTTGCCGGTGAGGGTTTTCACAAAGATTTGCAT 2542728
Score = 116 bits (128), Expect = 3e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| || || | ||| |||||||||||||| || || ||| |
Sbjct 5269468 CCACCACGGAGGCGGAGCACCAAGTGCAGGGTGGACTCCTTTTGAATATTATAGTCGGAC 5269409
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | |||||||| ||| |||||||||| || || || |||||
Sbjct 5269408 AGAGTACGACCATCTTCCAATTGCTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGA 5269349
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||||||||| ||| | | || |||| | || | |||||| | | ||||
Sbjct 5269348 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCGATAGTATCCGATGGTTCGAC 5269290
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| ||||| || || ||||| ||||| ||||||||
Sbjct 5269289 CTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTAACGAAGATCTGCAT 5269242
>seq5
Length=23724088
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| ||||| ||| || || | ||| |||||||| || ||||| |||||
Sbjct 5413799 GCCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGA 5413740
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| ||||||||||| || | || |||||||||||||| || ||
Sbjct 5413739 AAGAGTACGTCCATCCTCAAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGGTCTGGGGG 5413680
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| || || ||||| || || ||||| | ||| | ||||| | | ||| |
Sbjct 5413679 AATACCCTCCTTGTCCTGAATCTTGGCCTTGACATTCTCAATGGTATCAGAAGGCTCAAC 5413620
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || |||| |||||| ||||||||||||||
Sbjct 5413619 TTCCAAGGTGATTGTCTTGCCAGTTAAAGTTTTGACGAAAATCTGCAT 5413572
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| ||||| ||| || || | ||| |||||||| || ||||| |||||
Sbjct 5414027 GCCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGA 5413968
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| ||||||||||| ||| | || ||||||||||| || || ||
Sbjct 5413967 AAGAGTACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGG 5413908
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| || || ||| | | ||| | ||||| | || ||| |
Sbjct 5413907 AATACCTTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCAATGGTATCAGAGGGCTCAAC 5413848
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || || || | || || ||||| || ||||||
Sbjct 5413847 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATG 5413799
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| ||||| ||| || || | ||| |||||||| || ||||| |||||
Sbjct 5414255 GCCACCACGCAGACGCAACACCAAGTGGAGGGTTGACTCCTTCTGGATGTTATAATCAGA 5414196
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| ||||||||||| ||| | || ||||||||||| || || ||
Sbjct 5414195 AAGAGTACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGG 5414136
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| || || ||| | | ||| | ||||| | || ||| |
Sbjct 5414135 AATACCTTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCAATGGTATCAGAGGGCTCAAC 5414076
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || || || | || || ||||| || ||||||
Sbjct 5414075 CTCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATG 5414027
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||||| || ||||| | ||| |||||||| || || ||||| ||
Sbjct 5414482 CCGCCGCGAAGACGCAAAACCAAATGGAGGGTTGACTCCTTCTGGATATTGTAGTCAGAA 5414423
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| ||||||||||| ||| | || ||||||||||| || || ||
Sbjct 5414422 AGAGTACGTCCATCCTCCAGCTGCTTGCCAGCGAAAATCAAACGCTGCTGATCTGGGGGA 5414363
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || || ||| | | ||| | ||||| | || ||| |
Sbjct 5414362 ATACCTTCCTTGTCCTGAATCTTGGCCTTAACGTTCTCAATGGTATCAGAGGGCTCAACC 5414303
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || || || | || || ||||| || ||||||
Sbjct 5414302 TCGAGGGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATTTGCATG 5414255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012764599040
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