Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=33300182 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 || ||||| || || || ||||| | || || || ||||| || | || ||||| Sbjct 5269239 AAGATGCAGATCTTCGTTAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTCGAACCA 5269298 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 ||| || | | | || ||| || ||| ||||||||||| |||| ||| Sbjct 5269299 TCGGATACTATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGAT 5269358 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 |||||| | | || | || ||||| |||||||||||| | ||| || |||| ||| Sbjct 5269359 CAACAACGTTTAATCTTCGCTGGCAAGCAATTGGAAGATGGTCGTACTCTGTCCGACTAT 5269418 Query 111364 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||||| ||||| || || || || || || ||| | || || || ||||| Sbjct 5269419 AATATTCAAAAGGAGTCCACCCTGCACTTGGTGCTCCGCCTCCGTGGTGG 5269468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039969065200