Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_008953.1
Length=3935
Score E
Sequences producing significant alignments: (Bits) Value
seq5 114 3e-22
>seq5
Length=23724088
Score = 114 bits (126), Expect = 3e-22
Identities = 145/196 (74%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393
|| ||| ||| |||||||| | |||| ||| || || |||||||||||||| |||
Sbjct 2563767 CCGATGGCGCGTGTCTTTCCCAAGGTCACCAAATGCACCTTCCACAAATACGGTCCATCG 2563826
Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453
||| | | |||| | ||| || |||||| | || ||| |||| | ||||||||||||
Sbjct 2563827 GGCAGCGTACAAAAGTTCGACGGTCTCTGCGTGCTGCCGCTGAACATTGTCAACGAGAAG 2563886
Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCT-AGC-CATCATCAGCGGTATCGTTG 3511
||||| | |||||||||||||||||| | | || ||| || ||| | ||||| ||
Sbjct 2563887 ATCTATGTGTTCCTCTGGTTCTGGTTCATCATTCTGAGCATATTATCGGGCATATCGCTG 2563946
Query 3512 TTCTGTACCGCATTGC 3527
|| || ||||||||
Sbjct 2563947 GTC--TATCGCATTGC 2563960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 12479999181000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |