Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq5 114 3e-22 >seq5 Length=23724088 Score = 114 bits (126), Expect = 3e-22 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| |||||||| | |||| ||| || || |||||||||||||| ||| Sbjct 2563767 CCGATGGCGCGTGTCTTTCCCAAGGTCACCAAATGCACCTTCCACAAATACGGTCCATCG 2563826 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 ||| | | |||| | ||| || |||||| | || ||| |||| | |||||||||||| Sbjct 2563827 GGCAGCGTACAAAAGTTCGACGGTCTCTGCGTGCTGCCGCTGAACATTGTCAACGAGAAG 2563886 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCT-AGC-CATCATCAGCGGTATCGTTG 3511 ||||| | |||||||||||||||||| | | || ||| || ||| | ||||| || Sbjct 2563887 ATCTATGTGTTCCTCTGGTTCTGGTTCATCATTCTGAGCATATTATCGGGCATATCGCTG 2563946 Query 3512 TTCTGTACCGCATTGC 3527 || || |||||||| Sbjct 2563947 GTC--TATCGCATTGC 2563960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479999181000