Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02]
6 sequences; 135,748,557 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 6e-24
>seq2
Length=22510139
Score = 125 bits (138), Expect = 6e-24
Identities = 182/257 (71%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 37842 TGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATG 37901
|||||| |||| || | |||||||||| ||||| || |||||| | | | ||||||
Sbjct 17628671 TGGAACTCGGCGCAGCTGCAGCTTGTGCAGGAGGGCAAAATGCATGGCTTTTTACGCATG 17628730
Query 37902 TATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACCGCGCTCAACTACGCC 37961
|||||| |||||||||| | || ||| |||| | || || || | | || ||
Sbjct 17628731 TATTGGGCCAAGAAAATTCTTGAGTGGACTGAGACTCCTGAGCTGGCTTTGGAGTATGCT 17628790
Query 37962 ATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCTGT 38021
|| | || |||||||| || || | || || |||||||| || ||||| || |||||
Sbjct 17628791 ATATTGCTTAATGATAAATATAGTCTCGATGGTCGTGATCCTAATGGTTATGTGGGCTGC 17628850
Query 38022 TTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCAAG 38081
||||||| || |||| |||| ||| || ||| ||| | |||| | || |||
Sbjct 17628851 ATGTGGTCCATCGGCGGCATACATGATCAAGGTTGGAAAGAGCGTGCCATCTTTGGTAAG 17628910
Query 38082 ATTCGGTACATGAACTA 38098
||||| || ||||||||
Sbjct 17628911 ATTCGCTATATGAACTA 17628927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062370964812
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