Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2 125 6e-24 >seq2 Length=22510139 Score = 125 bits (138), Expect = 6e-24 Identities = 182/257 (71%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 37842 TGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATG 37901 |||||| |||| || | |||||||||| ||||| || |||||| | | | |||||| Sbjct 17628671 TGGAACTCGGCGCAGCTGCAGCTTGTGCAGGAGGGCAAAATGCATGGCTTTTTACGCATG 17628730 Query 37902 TATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACCGCGCTCAACTACGCC 37961 |||||| |||||||||| | || ||| |||| | || || || | | || || Sbjct 17628731 TATTGGGCCAAGAAAATTCTTGAGTGGACTGAGACTCCTGAGCTGGCTTTGGAGTATGCT 17628790 Query 37962 ATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCTGT 38021 || | || |||||||| || || | || || |||||||| || ||||| || ||||| Sbjct 17628791 ATATTGCTTAATGATAAATATAGTCTCGATGGTCGTGATCCTAATGGTTATGTGGGCTGC 17628850 Query 38022 TTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCAAG 38081 ||||||| || |||| |||| ||| || ||| ||| | |||| | || ||| Sbjct 17628851 ATGTGGTCCATCGGCGGCATACATGATCAAGGTTGGAAAGAGCGTGCCATCTTTGGTAAG 17628910 Query 38082 ATTCGGTACATGAACTA 38098 ||||| || |||||||| Sbjct 17628911 ATTCGCTATATGAACTA 17628927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062370964812