Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20busckii_20[refseq_20GCF_5F001277935.1_202015-09-02] 6 sequences; 135,748,557 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 113 5e-20 >seq2 Length=22510139 Score = 113 bits (124), Expect = 5e-20 Identities = 248/369 (67%), Gaps = 6/369 (2%) Strand=Plus/Minus Query 125773 CTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAATGGGTT 125832 |||||| |||||||| || || |||||||| || | ||||| || ||||| || Sbjct 3319284 CTTCTCAAAGAAGTTAGTTTTTCCGTCCAACGAAATCATTTCCATGAATGTCAATGGATT 3319225 Query 125833 CTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACGATCCGAGACGTACTC 125892 ||||| || | ||| || ||| |||| || || || ||||| | ||| |||| Sbjct 3319224 CTTTGTATTATAGATTTTTCCCACACCAAGCTCCACCAGCAGGCGATCAGCCACGAACTC 3319165 Query 125893 AATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGGGAGCGCGTCCAA 125952 ||||||||| |||||| | ||||||| || || | |||| ||| || || || Sbjct 3319164 AATGTACTCTGACATCAGAGCGCAGTTCATGCCAATCAAGTTAACTGGCAGAGCATCTGT 3319105 Query 125953 GATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGTGAATG--GTGTCCACC 126010 || |||| ||| ||||| | || || ||| | || || |||| | | ||| Sbjct 3319104 GAGGAACTCCTGTTCAATCTTGACAGCATCCTCAATAATTGC---AATGATGCGCTCACG 3319048 Query 126011 CCAGGTCTATTGC-GCAAAGTCTTGAAGAGTTCCACGGCAAACTCTTGGTGGAGACCCTC 126069 | || |||| |||| ||| | ||||||||| || ||| | ||||| Sbjct 3319047 GCTGGGACGTTGCACCAAATGGCGGAACATCAACACGGCAAAGTCACAGTGCAAGCCCTC 3318988 Query 126070 GTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAA 126129 || || ||||| || ||||| |||||| || || |||||||| || |||||||| | Sbjct 3318987 ATCGCGCGAGATTAGCTCATTGGAGAAGGTCAAGCCAGGCATGAGGCCACGCTTCTTTAG 3318928 Query 126130 CCAGAAAAT 126138 ||||||||| Sbjct 3318927 CCAGAAAAT 3318919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353555198480